ENSDARG00000045420


Danio rerio

Features
Gene ID: ENSDARG00000045420
  
Biological name :epdr1
  
Synonyms : epdr1 / ependymin related 1
  
Possible biological names infered from orthology : Mammalian ependymin-related protein 1 / Q99M71 / Q9UM22
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 31833997
Gene end: 31836902
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000066787
NCBI entrez gene - 436689     See in Manteia.
RefSeq - NM_001002416
RefSeq Peptide - NP_001002416
swissprot - Q6DH25
ZFIN ID - ZDB-GENE-040718-113
Ensembl - ENSDARG00000045420
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 EPDR1ENSGALG00000042063Gallus gallus
 EPDR1ENSG00000086289Homo sapiens
 Epdr1ENSMUSG00000002808Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
epdl2 / ependymin-like 2ENSDARG0000005553926
epdl1 / ependymin-like 1ENSDARG0000007638626
epd / P17561 / ependyminENSDARG0000010349820


Protein motifs (from Interpro)
Interpro ID Name
 IPR001299  Ependymin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007160 cell-matrix adhesion IEA
 cellular_componentGO:0005576 extracellular region IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000042 midbrain hindbrain boundary midbrain hindbrain boundary spatial pattern , abnormal
midbrain hindbrain boundary decreased amount , abnormal
Show

 ZFA:0000137 optic stalk optic stalk decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr