ENSDARG00000052025


Danio rerio

Features
Gene ID: ENSDARG00000052025
  
Biological name :pomgnt1
  
Synonyms : pomgnt1 / protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)
  
Possible biological names infered from orthology : Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 / Q8WZA1 / Q91X88
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 33076839
Gene end: 33095766
  
Corresponding Affymetrix probe sets: Dr.16203.1.A1_at (Zebrafish Array)   NM_001042687_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000068245
Ensembl peptide - ENSDARP00000109849
NCBI entrez gene - 571876     See in Manteia.
RefSeq - NM_001042687
RefSeq Peptide - NP_001036152
swissprot - F1QNB2
swissprot - E7FCA9
ZFIN ID - ZDB-GENE-070112-991
Ensembl - ENSDARG00000052025
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 POMGNT1ENSGALG00000010351Gallus gallus
 Q8WZA1ENSG00000085998Homo sapiens
 Q91X88ENSMUSG00000028700Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mgat1a / mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase a / MGAT1* / P27808* / P26572* / Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase ...ENSDARG0000001240720
mgat1b / mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase b / MGAT1* / P27808* / P26572* / Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase ...ENSDARG0000003606518


Protein motifs (from Interpro)
Interpro ID Name
 IPR004139  Glycosyl transferase, family 13
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006486 protein glycosylation IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008375 acetylglucosaminyltransferase activity IEA


Pathways (from Reactome)
Pathway description
O-linked glycosylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000016153 dag1 / dystroglycan 1 / Q14118* / Q62165* / Dystroglycan Alpha-dystroglycan Beta-dystroglycan*  / reaction






 

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