ENSDARG00000052138


Danio rerio

Features
Gene ID: ENSDARG00000052138
  
Biological name :slc1a2a
  
Synonyms : slc1a2a / solute carrier family 1 (glial high affinity glutamate transporter), member 2a
  
Possible biological names infered from orthology : P43004 / P43006 / SLC1A2 / solute carrier family 1 (glial high affinity glutamate transporter), member 2 / solute carrier family 1 member 2
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 49862837
Gene end: 49881742
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000136807
Ensembl peptide - ENSDARP00000143212
Ensembl peptide - ENSDARP00000143007
NCBI entrez gene - 560802     See in Manteia.
RefSeq - NM_001190305
RefSeq - XM_005166477
RefSeq Peptide - NP_001177234
swissprot - A0A0R4IM70
swissprot - D7RVR8
swissprot - A0A1L1QZT2
ZFIN ID - ZDB-GENE-100422-11
Ensembl - ENSDARG00000052138
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC1A2ENSGALG00000037556Gallus gallus
 P43004ENSG00000110436Homo sapiens
 P43006ENSMUSG00000005089Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc1a2b / solute carrier family 1 (glial high affinity glutamate transporter), member 2b / P43006* / SLC1A2* / P43004* / solute carrier family 1 member 2* / solute carrier family 1 (glial h...ENSDARG0000010245381
slc1a1 / solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 / P43005* / P51906* / solute carrier family 1 member 1*ENSDARG0000002021247
slc1a3b / solute carrier family 1 (glial high affinity glutamate transporter), member 3b / P56564* / SLC1A3* / P43003* / solute carrier family 1 member 3* / solute carrier family 1 (glial h...ENSDARG0000004314847
slc1a6 / solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6 / O35544* / P48664* / solute carrier family 1 member 6*ENSDARG0000001009645
slc1a3a / solute carrier family 1 (glial high affinity glutamate transporter), member 3a / P43003* / SLC1A3* / solute carrier family 1 member 3*ENSDARG0000010443145
slc1a7b / solute carrier family 1 (glutamate transporter), member 7b / SLC1A7* / O00341* / solute carrier family 1 member 7* / solute carrier family 1 (glutamate transporter), member 7*ENSDARG0000002624842
slc1a8b / solute carrier family 1 (glutamate transporter), member 8bENSDARG0000003246542
slc1a7a / solute carrier family 1 (glutamate transporter), member 7a / SLC1A7* / O00341* / solute carrier family 1 member 7* / solute carrier family 1 (glutamate transporter), member 7*ENSDARG0000003494042
slc1a8a / solute carrier family 1 (glutamate transporter), member 8aENSDARG0000010420441
slc1a4 / solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 / O35874* / P43007* / solute carrier family 1 member 4*ENSDARG0000000055137
slc1a5 / solute carrier family 1 (neutral amino acid transporter), member 5 / Q15758* / solute carrier family 1 member 5*ENSDARG0000009918637


Protein motifs (from Interpro)
Interpro ID Name
 IPR001991  Sodium:dicarboxylate symporter
 IPR018107  Sodium:dicarboxylate symporter, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0015293 symporter activity IEA


Pathways (from Reactome)
Pathway description
Astrocytic Glutamate-Glutamine Uptake And Metabolism
Glutamate Neurotransmitter Release Cycle
Transport of inorganic cations/anions and amino acids/oligopeptides


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000152 retina retina decreased functionality , abnormal
Show

 ZFA:0001330 retinal outer plexiform layer retinal outer plexiform layer decreased amount , abnormal
Show

 ZFA:0009319 ON-bipolar cell ON-bipolar cell functionality , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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