ENSDARG00000052190


Danio rerio

Features
Gene ID: ENSDARG00000052190
  
Biological name :fdx1l
  
Synonyms : fdx1l / ferredoxin 1-like
  
Possible biological names infered from orthology : AC011511.1 / AC163637.1 / FDX2 / ferredoxin 2 / Ferredoxin-2, mitochondrial / Q6P4F2 / Q9CPW2
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 149405
Gene end: 152955
  
Corresponding Affymetrix probe sets: Dr.18882.1.A1_at (Zebrafish Array)   NM_001076664_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000131094
NCBI entrez gene - 767726     See in Manteia.
RefSeq - NM_001076664
RefSeq Peptide - NP_001070132
swissprot - G1K2T3
swissprot - A0A0R4IBU4
ZFIN ID - ZDB-GENE-060929-1046
Ensembl - ENSDARG00000052190
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AC011511.1ENSG00000167807Homo sapiens
 FDX2ENSG00000267673Homo sapiens
 AC163637.1ENSMUSG00000111692Mus musculus
 Fdx1lENSMUSG00000079677Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fdx1 / ferredoxin 1 / P10109* / P46656*ENSDARG0000005641026
fdx1b / ferredoxin 1bENSDARG0000003895622


Protein motifs (from Interpro)
Interpro ID Name
 IPR001041  2Fe-2S ferredoxin-type iron-sulfur binding domain
 IPR001055  Adrenodoxin
 IPR012675  Beta-grasp domain superfamily
 IPR018298  Adrenodoxin, iron-sulphur binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0022900 electron transport chain IEA
 molecular_functionGO:0009055 electron transfer activity IEA
 molecular_functionGO:0051536 iron-sulfur cluster binding IEA
 molecular_functionGO:0051537 2 iron, 2 sulfur cluster binding IEA


Pathways (from Reactome)
Pathway description
Mitochondrial iron-sulfur cluster biogenesis
Pregnenolone biosynthesis
Endogenous sterols
Electron transport from NADPH to Ferredoxin


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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