ENSDARG00000052360


Danio rerio

Features
Gene ID: ENSDARG00000052360
  
Biological name :cacng1b
  
Synonyms : cacng1b / calcium channel, voltage-dependent, gamma subunit 1b
  
Possible biological names infered from orthology : CACNG1 / calcium voltage-gated channel auxiliary subunit gamma 1 / O70578 / Q06432 / Voltage-dependent calcium channel gamma-1 subunit
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 61043774
Gene end: 61065055
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000068688
NCBI entrez gene - 571193     See in Manteia.
swissprot - E7F1R5
ZFIN ID - ZDB-GENE-131127-98
Ensembl - ENSDARG00000052360
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CACNG1ENSGALG00000027771Gallus gallus
 CACNG1ENSG00000108878Homo sapiens
 Cacng1ENSMUSG00000020722Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cacng1a / calcium channel, voltage-dependent, gamma subunit 1a / CACNG1* / Q06432* / calcium voltage-gated channel auxiliary subunit gamma 1*ENSDARG0000000877268
cacng6b / calcium channel, voltage-dependent, gamma subunit 6b / CACNG6* / Q8VHW3* / Q9BXT2* / Voltage-dependent calcium channel gamma-6 subunit * / calcium voltage-gated channel auxiliary ...ENSDARG0000004607934
cacng6a / calcium channel, voltage-dependent, gamma subunit 6a / CACNG6* / Q8VHW3* / Q9BXT2* / Voltage-dependent calcium channel gamma-6 subunit * / calcium voltage-gated channel auxiliary ...ENSDARG0000003645733


Protein motifs (from Interpro)
Interpro ID Name
 IPR004031  PMP-22/EMP/MP20/Claudin superfamily
 IPR005421  Voltage-dependent calcium channel, gamma-1 subunit
 IPR008368  Voltage-dependent calcium channel, gamma subunit


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006816 calcium ion transport IEA
 biological_processGO:0034765 regulation of ion transmembrane transport IEA
 biological_processGO:0070588 calcium ion transmembrane transport IEA
 cellular_componentGO:0005891 voltage-gated calcium channel complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005244 voltage-gated ion channel activity IEA
 molecular_functionGO:0005245 voltage-gated calcium channel activity IEA
 molecular_functionGO:0005262 calcium channel activity IEA


Pathways (from Reactome)
Pathway description
Phase 0 - rapid depolarisation
Phase 2 - plateau phase


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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