ENSDARG00000052652


Danio rerio

Features
Gene ID: ENSDARG00000052652
  
Biological name :fermt1
  
Synonyms : fermitin family member 1 / fermt1
  
Possible biological names infered from orthology : Fermitin family homolog 1 / P59113 / Q9BQL6
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 45775935
Gene end: 45812152
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000069034
Ensembl peptide - ENSDARP00000116317
Ensembl peptide - ENSDARP00000122875
NCBI entrez gene - 100332544     See in Manteia.
swissprot - E9QBZ4
swissprot - E9QJJ7
ZFIN ID - ZDB-GENE-030131-3264
Ensembl - ENSDARG00000052652
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FERMT1ENSGALG00000008827Gallus gallus
 FERMT1ENSG00000101311Homo sapiens
 Fermt1ENSMUSG00000027356Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
F1Q8X5 / fermt2 / fermitin family member 2 / Q8CIB5* / Q96AC1* / Fermitin family homolog 2 *ENSDARG0000002024261
im:7154036 / FERMT3 (1 of many) / FERMT3* / Q86UX7* / Q8K1B8* / fermitin family member 3* / Fermitin family homolog 3 *ENSDARG0000007926751
fermt3b / fermitin family member 3b / Q8K1B8* / FERMT3* / Q86UX7* / fermitin family member 3* / Fermitin family homolog 3 *ENSDARG0000003093849


Protein motifs (from Interpro)
Interpro ID Name
 IPR001849  Pleckstrin homology domain
 IPR011993  PH-like domain superfamily
 IPR014352  FERM/acyl-CoA-binding protein superfamily
 IPR019748  FERM central domain
 IPR019749  Band 4.1 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007229 integrin-mediated signaling pathway IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001180 epidermal basal stratum epidermal basal stratum malformed , abnormal
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 ZFA:0005597 median fin median fin broken , abnormal
median fin ruffled , abnormal
median fin absent , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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