ENSDARG00000052712


Danio rerio

Features
Gene ID: ENSDARG00000052712
  
Biological name :suclg1
  
Synonyms : succinate-CoA ligase, alpha subunit / suclg1
  
Possible biological names infered from orthology : P53597 / Q9WUM5 / Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 43652480
Gene end: 43684584
  
Corresponding Affymetrix probe sets: Dr.944.1.S1_at (Zebrafish Array)   NM_001002577_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000069096
NCBI entrez gene - 436850     See in Manteia.
RefSeq - NM_001002577
RefSeq Peptide - NP_001002577
swissprot - B8JI00
ZFIN ID - ZDB-GENE-040912-101
Ensembl - ENSDARG00000052712
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SUCLG1ENSGALG00000015961Gallus gallus
 P53597ENSG00000163541Homo sapiens
 Q9WUM5ENSMUSG00000052738Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
aclya / ATP citrate lyase a / ACLY* / P53396* / Q91V92* / ATP citrate lyase*ENSDARG0000009907926
aclyb / ATP citrate lyase b / ACLY* / P53396* / Q91V92* / ATP citrate lyase*ENSDARG0000005565225


Protein motifs (from Interpro)
Interpro ID Name
 IPR003781  CoA-binding
 IPR005810  Succinyl-CoA ligase, alpha subunit
 IPR005811  ATP-citrate lyase/succinyl-CoA ligase
 IPR016040  NAD(P)-binding domain
 IPR016102  Succinyl-CoA synthetase-like
 IPR017440  ATP-citrate lyase/succinyl-CoA ligase, active site
 IPR033847  ATP-citrate lyase/succinyl-CoA ligase, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006099 tricarboxylic acid cycle IEA
 biological_processGO:0008152 metabolic process IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005759 mitochondrial matrix IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004775 succinate-CoA ligase (ADP-forming) activity IEA
 molecular_functionGO:0004776 succinate-CoA ligase (GDP-forming) activity IBA
 molecular_functionGO:0016874 ligase activity IEA
 molecular_functionGO:0048037 cofactor binding IEA


Pathways (from Reactome)
Pathway description
Citric acid cycle (TCA cycle)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000005359 sucla2 / succinate-CoA ligase, ADP-forming, beta subunit / Q9P2R7* / Q9Z2I9* / Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial *  / complex
 ENSDARG00000044914 suclg2 / succinate-CoA ligase, GDP-forming, beta subunit / Q96I99* / Q9Z2I8* / Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial *  / complex






 

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