ENSDARG00000053019


Danio rerio

Features
Gene ID: ENSDARG00000053019
  
Biological name :rnft2
  
Synonyms : ring finger protein, transmembrane 2 / rnft2
  
Possible biological names infered from orthology : Q3UF64 / Q96EX2 / RING finger and transmembrane domain-containing protein 2
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 11916928
Gene end: 11944398
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000069465
Ensembl peptide - ENSDARP00000141473
Ensembl peptide - ENSDARP00000140100
NCBI entrez gene - 553554     See in Manteia.
RefSeq - NM_001020533
RefSeq - XM_021476156
RefSeq Peptide - NP_001018369
swissprot - F1Q8R4
swissprot - A0A0R4IZA5
swissprot - A0A0R4IX44
ZFIN ID - ZDB-GENE-050522-168
Ensembl - ENSDARG00000053019
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RNFT2ENSGALG00000008217Gallus gallus
 RNFT2ENSG00000135119Homo sapiens
 Rnft2ENSMUSG00000032850Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rnft1 / Q6NZ21 / ring finger protein, transmembrane 1 / Q9DCN7* / Q5M7Z0* / E3 ubiquitin-protein ligase RNFT1 *ENSDARG0000001591729


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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