ENSDARG00000053530


Danio rerio

Features
Gene ID: ENSDARG00000053530
  
Biological name :cyp4f3
  
Synonyms : cyp4f3 / cytochrome P450, family 4, subfamily F, polypeptide 3
  
Possible biological names infered from orthology : CYP4F11 / CYP4F12 / Cyp4f13 / Cyp4f14 / Cyp4f15 / Cyp4f16 / Cyp4f17 / Cyp4f18 / CYP4F2 / CYP4F22 / Cyp4f37 / Cyp4f39 / Cyp4f40 / CYP4F8 / cytochrome P450 family 4 subfamily F member 11 / cytochrome P450 family 4 subfamily F member 12 / cytochrome P450 family 4 subfamily F member 2 / cytochrome P450 family 4 subfamily F member 22 / cytochrome P450 family 4 subfamily F member 3 / cytochrome P450 family 4 subfamily F member 8 / cytochrome P450, family 4, subfamily f, polypeptide 13 / cytochrome P450, family 4, subfamily f, polypeptide 15 / cytochrome P450, family 4, subfamily f, polypeptide 16 / cytochrome P450, family 4, subfamily f, polypeptide 17 / cytochrome P450, family 4, subfamily f, polypeptide 37 / cytochrome P450, family 4, subfamily f, polypeptide 39 / cytochrome P450, family 4, subfamily f, polypeptide 40 / Leukotriene-B(4) omega-hydroxylase 2 / Mus musculus cytochrome P450, family 4, subfamily f, polypeptide 14 (Cyp4f14), transcript variant 6, mRNA. / P78329 / P98187 / Q08477 / Q6NT55 / Q99N16 / Q9EP75 / Q9HBI6 / Q9HCS2
  
Species: Danio rerio
  
Chr. number: 12
Strand: -1
Band:
Gene start: 48559480
Gene end: 48566778
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000063441
swissprot - F1RDH6
ZFIN ID - ZDB-GENE-070410-108
Ensembl - ENSDARG00000053530
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CYP4F2ENSG00000186115Homo sapiens
 CYP4F3ENSG00000186529Homo sapiens
 CYP4F8ENSG00000186526Homo sapiens
 Q6NT55ENSG00000171954Homo sapiens
 Q9HBI6ENSG00000171903Homo sapiens
 Q9HCS2ENSG00000186204Homo sapiens
 Cyp4f13ENSMUSG00000024055Mus musculus
 Cyp4f15ENSMUSG00000073424Mus musculus
 Cyp4f16ENSMUSG00000048440Mus musculus
 Cyp4f17ENSMUSG00000091586Mus musculus
 Cyp4f37ENSMUSG00000062464Mus musculus
 Cyp4f39ENSMUSG00000061126Mus musculus
 Cyp4f40ENSMUSG00000090700Mus musculus
 Q99N16ENSMUSG00000003484Mus musculus
 Q9EP75ENSMUSG00000024292Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cyp4t8 / cytochrome P450, family 4, subfamily T, polypeptide 8 / O88833* / O35728* / Q86W10* / Q8N118* / Q91WL5* / CYP4B1* / CYP4X1* / CYP4Z1* / Q6A152* / Q5TCH4* / Q64462* / Q02928* / P135...ENSDARG0000000496435
cyp4v7 / cytochrome P450, family 4, subfamily V, polypeptide 7 / CYP4V2* / Cyp4v3* / Q6ZWL3* / Q9DBW0* / Cytochrome P450 4V2 * / cytochrome P450 family 4 subfamily V member 2*ENSDARG0000006158533
cyp4v8 / cytochrome P450, family 4, subfamily V, polypeptide 8 / CYP4V2* / Cyp4v3* / Q6ZWL3* / Q9DBW0* / Cytochrome P450 4V2 * / cytochrome P450 family 4 subfamily V member 2*ENSDARG0000006213233


Protein motifs (from Interpro)
Interpro ID Name
 IPR001128  Cytochrome P450
 IPR002403  Cytochrome P450, E-class, group IV
 IPR017972  Cytochrome P450, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004497 monooxygenase activity IEA
 molecular_functionGO:0005506 iron ion binding IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
 molecular_functionGO:0020037 heme binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Fatty acids
Miscellaneous substrates
Eicosanoids
Synthesis of Leukotrienes (LT) and Eoxins (EX)
Synthesis of (16-20)-hydroxyeicosatetraenoic acids (HETE)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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