ENSDARG00000054023


Danio rerio

Features
Gene ID: ENSDARG00000054023
  
Biological name :ttll6
  
Synonyms : ttll6 / tubulin tyrosine ligase-like family, member 6
  
Possible biological names infered from orthology : A4Q9E8 / Q8N841 / tubulin tyrosine ligase like 6
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 27096835
Gene end: 27115412
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000066277
Ensembl peptide - ENSDARP00000124051
Ensembl peptide - ENSDARP00000124416
swissprot - F1Q6Z2
swissprot - F8W3S3
ZFIN ID - ZDB-GENE-080107-1
Ensembl - ENSDARG00000054023
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TTLL6ENSG00000170703Homo sapiens
 Ttll6ENSMUSG00000038756Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ttll7 / tubulin tyrosine ligase-like family, member 7 / Q6ZT98* / tubulin tyrosine ligase like 7*ENSDARG0000006297327
ttll5 / tubulin tyrosine ligase-like family, member 5 / Q6EMB2* / tubulin tyrosine ligase like 5*ENSDARG0000003679321
ttll11 / tubulin tyrosine ligase-like family, member 11 / A4Q9F4* / Q8NHH1* / tubulin tyrosine ligase like 11*ENSDARG0000006037421
ttll9 / tubulin tyrosine ligase-like family, member 9 / A2APC3* / Q3SXZ7* / tubulin tyrosine ligase like 9*ENSDARG0000006280616
ttll2 / tubulin tyrosine ligase-like family, member 2 / Q9BWV7* / tubulin tyrosine ligase like 2*ENSDARG0000007785316
ttll4 / tubulin tyrosine ligase-like family, member 4 / Q14679* / Q80UG8* / tubulin tyrosine ligase like 4*ENSDARG0000007893516
ttll3 / tubulin tyrosine ligase-like family, member 3 / Q9Y4R7* / A4Q9E5* / ARPC4-TTLL3* / ARPC4-TTLL3 readthrough* / tubulin tyrosine ligase like 3*ENSDARG0000005372815
ttll1 / tubulin tyrosine ligase-like family, member 1 / O95922* / Q91V51* / tubulin tyrosine ligase like 1*ENSDARG0000009077815
ttll10 / tubulin tyrosine ligase-like family, member 10 / Q6ZVT0* / tubulin tyrosine ligase like 10*ENSDARG0000009047210


Protein motifs (from Interpro)
Interpro ID Name
 IPR004344  Tubulin-tyrosine ligase/Tubulin polyglutamylase
 IPR027754  Tubulin polyglutamylase TTLL6


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006464 cellular protein modification process IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000048 olfactory placode olfactory placode cilium decreased length , abnormal
olfactory placode cilium decreased amount , abnormal
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 ZFA:0000114 heart heart edematous , abnormal
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 ZFA:0000150 pronephric duct pronephric duct axonemal microtubule increased amount , abnormal
pronephric duct axonemal microtubule decreased size , abnormal
pronephric duct axoneme morphology , abnormal
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 ZFA:0000151 pronephros pronephros cystic , abnormal
pronephros axonemal dynein complex decreased amount , abnormal
pronephros cilium uncoordinated , abnormal
pronephros axoneme structure , abnormal
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 ZFA:0000217 inner ear inner ear lacks parts or has fewer parts of type otolith , abnormal
inner ear altered number of otolith , abnormal
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 ZFA:0001094 whole organism whole organism anterior-posterior axis curved ventral , abnormal
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 ZFA:0001114 head head hydrocephalic , abnormal
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 ZFA:0001117 post-vent region post-vent region morphology , abnormal
post-vent region curved , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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