ENSDARG00000054400


Danio rerio

Features
Gene ID: ENSDARG00000054400
  
Biological name :si:ch211-198n5.11
  
Synonyms : si:ch211-198n5.11
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 16676894
Gene end: 16688511
  
Corresponding Affymetrix probe sets: Dr.9731.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000071058
Ensembl peptide - ENSDARP00000117228
NCBI entrez gene - 100004018     See in Manteia.
RefSeq - NM_001113652
RefSeq Peptide - NP_001107124
swissprot - E9QCI6
swissprot - A9C3S0
ZFIN ID - ZDB-GENE-050411-52
Ensembl - ENSDARG00000054400
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MCCC2LENSGALG00000011255Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mccc2 / methylcrotonoyl-CoA carboxylase 2 (beta) / Q3ULD5* / Q9HCC0* / methylcrotonoyl-CoA carboxylase 2* / Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial *ENSDARG0000001757140
pccb / propionyl CoA carboxylase, beta polypeptide / Q99MN9* / P05166* / propionyl-CoA carboxylase beta subunit* / Propionyl-CoA carboxylase beta chain, mitochondrial *ENSDARG0000003891022


Protein motifs (from Interpro)
Interpro ID Name
 IPR029045  ClpP/crotonase-like domain superfamily
 IPR034733  Acetyl-CoA carboxylase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0016874 ligase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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