ENSDARG00000055124


Danio rerio

Features
Gene ID: ENSDARG00000055124
  
Biological name :ccnl1a
  
Synonyms : ccnl1a / cyclin L1a
  
Possible biological names infered from orthology : CCNL1 / cyclin L1 / Mus musculus cyclin L1 (Ccnl1), transcript variant 2, mRNA. / Q52KE7 / Q9UK58
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 41512102
Gene end: 41526488
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000071902
Ensembl peptide - ENSDARP00000114934
Ensembl peptide - ENSDARP00000110530
NCBI entrez gene - 553269     See in Manteia.
RefSeq - NM_001089363
RefSeq - XM_005159224
RefSeq Peptide - NP_001082832
swissprot - E7F8K9
swissprot - A2BID3
ZFIN ID - ZDB-GENE-050419-206
Ensembl - ENSDARG00000055124
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CCNL1ENSGALG00000009699Gallus gallus
 CCNL1ENSG00000163660Homo sapiens
 Ccnl1ENSMUSG00000027829Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ccnl1b / cyclin L1b / CCNL1* / Q52KE7* / Q9UK58* / cyclin L1* / Mus musculus cyclin L1 (Ccnl1), transcript variant 2, mRNA.*ENSDARG0000001214064
ccnt2a / cyclin T2a / CCNT2* / O60583* / Q7TQK0* / cyclin T2*ENSDARG0000003668520
ccnt1 / cyclin T1 / O60563* / Q9QWV9*ENSDARG0000001752519
ccnt2b / cyclin T2bENSDARG0000003651019
ccnk / cyclin K / O75909*ENSDARG0000003414617
ccnc / cyclin C / P24863* / Q62447*ENSDARG0000000960713
ccnq / cyclin Q / Fam58b* / Q8QZR8* / Q8N1B3* / family with sequence similarity 58, member B*ENSDARG0000003753713


Protein motifs (from Interpro)
Interpro ID Name
 IPR004367  Cyclin, C-terminal domain
 IPR006671  Cyclin, N-terminal
 IPR013763  Cyclin-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006396 RNA processing IEA
 biological_processGO:0045737 positive regulation of cyclin-dependent protein serine/threonine kinase activity IBA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IBA
 biological_processGO:1901409 positive regulation of phosphorylation of RNA polymerase II C-terminal domain IBA
 cellular_componentGO:0000307 cyclin-dependent protein kinase holoenzyme complex IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr