ENSDARG00000055172


Danio rerio

Features
Gene ID: ENSDARG00000055172
  
Biological name :si:ch211-256m1.8
  
Synonyms : si:ch211-256m1.8
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 25154078
Gene end: 25165189
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000129491
NCBI entrez gene - 795494     See in Manteia.
RefSeq - XM_001335646
swissprot - E7FA20
ZFIN ID - ZDB-GENE-131127-417
Ensembl - ENSDARG00000055172
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000246  Peptidase T2, asparaginase 2
 IPR000542  Acyltransferase ChoActase/COT/CPT
 IPR001310  Histidine triad (HIT) protein
 IPR004364  Aminoacyl-tRNA synthetase, class II (D/K/N)
 IPR006195  Aminoacyl-tRNA synthetase, class II
 IPR011146  HIT-like domain
 IPR029055  Nucleophile aminohydrolases, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006418 tRNA aminoacylation for protein translation IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004812 aminoacyl-tRNA ligase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016746 transferase activity, transferring acyl groups IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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