ENSDARG00000055223


Danio rerio

Features
Gene ID: ENSDARG00000055223
  
Biological name :ablim2
  
Synonyms : ablim2 / actin binding LIM protein family, member 2
  
Possible biological names infered from orthology : actin-binding LIM protein 2 / Q6H8Q1 / Q8BL65
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 22680115
Gene end: 22815847
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000145566
Ensembl peptide - ENSDARP00000072015
Ensembl peptide - ENSDARP00000127095
Ensembl peptide - ENSDARP00000151107
swissprot - U3JA30
swissprot - E7F030
ZFIN ID - ZDB-GENE-100316-5
Ensembl - ENSDARG00000055223
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ABLIM2ENSGALG00000043448Gallus gallus
 ABLIM2ENSG00000163995Homo sapiens
 Ablim2ENSMUSG00000029095Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ablim1a / actin binding LIM protein 1a / ABLIM1* / O14639* / Q8K4G5* / actin binding LIM protein 1*ENSDARG0000006014947
ablim3 / actin binding LIM protein family, member 3 / O94929* / Q69ZX8*ENSDARG0000008816846
ablim1b / actin binding LIM protein 1b / ABLIM1* / O14639* / Q8K4G5* / actin binding LIM protein 1*ENSDARG0000004506432
dmtn / dematin actin binding protein / Q08495* / Q9WV69* / Dematin *ENSDARG0000001311015
lpp / LIM domain containing preferred translocation partner in lipoma / Q8BFW7* / Q93052* / Lipoma-preferred partner homolog *ENSDARG0000002357811
trip6 / thyroid hormone receptor interactor 6 / Q15654* / Q9Z1Y4*ENSDARG0000006933110
zyx / zyxin / Q15942* / Q62523*ENSDARG0000007573310
wtip / A8DZE6 / WT1 interacting protein / A6NIX2* / Q7TQJ8*ENSDARG000001036079
fblim1 / filamin binding LIM protein 1 / Q71FD7* / Q8WUP2*ENSDARG000000715588
ajuba / ajuba LIM protein / Q91XC0* / Q96IF1* / LIM domain-containing protein ajuba *ENSDARG000000778428
BX465198.3 / DMTN* / Q08495* / dematin actin binding protein*ENSDARG000001164846
CABZ01043952.1 / LIMD1* / Q9UGP4* / LIM domains containing 1*ENSDARG000001109545


Protein motifs (from Interpro)
Interpro ID Name
 IPR001781  Zinc finger, LIM-type
 IPR003128  Villin headpiece
 IPR028450  Actin-binding LIM protein 2
 IPR032402  Putative adherens-junction anchoring domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0007010 cytoskeleton organization IEA
 biological_processGO:0030036 actin cytoskeleton organization IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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