ENSDARG00000056050


Danio rerio

Features
Gene ID: ENSDARG00000056050
  
Biological name :kctd17
  
Synonyms : kctd17 / potassium channel tetramerization domain containing 17
  
Possible biological names infered from orthology : BTB/POZ domain-containing protein KCTD17 isoform 3 / Q8N5Z5
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 19036380
Gene end: 19065298
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000127157
Ensembl peptide - ENSDARP00000147263
NCBI entrez gene - 568267     See in Manteia.
RefSeq - XM_005156179
RefSeq - XM_021474248
RefSeq - XM_691587
RefSeq - XM_021474247
swissprot - U3JA92
ZFIN ID - ZDB-GENE-130531-80
Ensembl - ENSDARG00000056050
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 KCTD17ENSGALG00000042419Gallus gallus
 KCTD17ENSG00000100379Homo sapiens
 Kctd17ENSMUSG00000033287Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
kctd5a / potassium channel tetramerization domain containing 5a / KCTD5* / Q9NXV2* / potassium channel tetramerization domain containing 5*ENSDARG0000001572250
kctd2 / potassium channel tetramerization domain containing 2 / Q14681*ENSDARG0000002587547
CABZ01055522.1 / KCTD5* / Q9NXV2* / potassium channel tetramerization domain containing 5*ENSDARG0000009881730
kctd9b / potassium channel tetramerization domain containing 9b / KCTD9* / Q7L273* / Q80UN1* / BTB/POZ domain-containing protein KCTD9 * / potassium channel tetramerization domain containing 9*ENSDARG0000001060325
kctd9a / potassium channel tetramerization domain containing 9a / KCTD9* / Q7L273* / Q80UN1* / BTB/POZ domain-containing protein KCTD9 * / potassium channel tetramerization domain containing 9*ENSDARG0000002120924


Protein motifs (from Interpro)
Interpro ID Name
 IPR000210  BTB/POZ domain
 IPR003131  Potassium channel tetramerisation-type BTB domain
 IPR011333  SKP1/BTB/POZ domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IBA
 biological_processGO:0051260 protein homooligomerization IEA
 cellular_componentGO:0031463 Cul3-RING ubiquitin ligase complex IBA
 molecular_functionGO:0097602 cullin family protein binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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