ENSDARG00000056078


Danio rerio

Features
Gene ID: ENSDARG00000056078
  
Biological name :rftn2
  
Synonyms : raftlin family member 2 / rftn2
  
Possible biological names infered from orthology : Q52LD8 / Q8CHX7 / Raftlin-2
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 32312920
Gene end: 32343673
  
Corresponding Affymetrix probe sets: Dr.9633.1.A1_at (Zebrafish Array)   NM_213420_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000072961
NCBI entrez gene - 406729     See in Manteia.
RefSeq - NM_213420
RefSeq Peptide - NP_998585
swissprot - B8A5C2
ZFIN ID - ZDB-GENE-040426-2760
Ensembl - ENSDARG00000056078
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RFTN2ENSGALG00000036471Gallus gallus
 RFTN2ENSG00000162944Homo sapiens
 Rftn2ENSMUSG00000025978Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rftn1a / raftlin, lipid raft linker 1a / RFTN1* / Q6A0D4* / Q14699* / Raftlin * / raftlin, lipid raft linker 1*ENSDARG0000007083128
FQ976914.1 / RFTN1* / Q14699* / raftlin, lipid raft linker 1*ENSDARG0000009865425


Protein motifs (from Interpro)
Interpro ID Name
 IPR028169  Raftlin family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0032596 protein transport into membrane raft IBA
 biological_processGO:0050851 antigen receptor-mediated signaling pathway IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0045121 membrane raft IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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