ENSDARG00000056186


Danio rerio

Features
Gene ID: ENSDARG00000056186
  
Biological name :eif5a2
  
Synonyms : eif5a / eif5a2 / eukaryotic translation initiation factor 5A2
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 25839193
Gene end: 25845337
  
Corresponding Affymetrix probe sets: Dr.8.1.S1_at (Zebrafish Array)   Dr.8.1.S2_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000117771
Ensembl peptide - ENSDARP00000120991
Ensembl peptide - ENSDARP00000117947
Ensembl peptide - ENSDARP00000073095
Ensembl peptide - ENSDARP00000112181
NCBI entrez gene - 406546     See in Manteia.
swissprot - B0UY94
swissprot - A7MCI0
swissprot - Q7ZUP4
ZFIN ID - ZDB-GENE-040426-2229
ZFIN ID - ZDB-GENE-040426-2405
Ensembl - ENSDARG00000056186
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
eif5a / eukaryotic translation initiation factor 5A / Q9GZV4* / EIF5A2* / P63241* / P63242* / Q6IS14* / Q8BGY2* / EIF5AL1* / eukaryotic translation initiation factor 5A2* / Eukaryotic trans...ENSDARG0000001723579


Protein motifs (from Interpro)
Interpro ID Name
 IPR001884  Translation elongation factor IF5A-like
 IPR008991  Translation protein SH3-like domain superfamily
 IPR012340  Nucleic acid-binding, OB-fold
 IPR014722  Ribosomal protein L2, domain 2
 IPR019769  Translation elongation factor, IF5A, hypusine site
 IPR020189  Translation elongation factor, IF5A C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0006452 translational frameshifting IEA
 biological_processGO:0045901 positive regulation of translational elongation IEA
 biological_processGO:0045905 positive regulation of translational termination IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003746 translation elongation factor activity IEA
 molecular_functionGO:0043022 ribosome binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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