ENSDARG00000056479


Danio rerio

Features
Gene ID: ENSDARG00000056479
  
Biological name :rab1bb
  
Synonyms : rab1bb / RAB1B, member RAS oncogene family b
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 26926654
Gene end: 26933708
  
Corresponding Affymetrix probe sets: Dr.21919.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000073437
Ensembl peptide - ENSDARP00000091062
NCBI entrez gene - 415219     See in Manteia.
swissprot - F1QYB8
swissprot - Q4V984
ZFIN ID - ZDB-GENE-040625-133
Ensembl - ENSDARG00000056479
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rab1ba / zRAB1B, member RAS oncogene family aENSDARG0000005804494
rab1ab / RAB1A, member RAS oncogene family b / Rab1* / RAB1A* / P62821* / P62820* / Ras-related protein Rab-1A * / RAB1A, member RAS oncogene family*ENSDARG0000002966392
rab1aa / RAB1A, member RAS oncogene family aENSDARG0000005226391
zgc:171927 / RAB1B* / Q9D1G1* / Q9H0U4* / RAB1B, member RAS oncogene family*ENSDARG0000003305677
si:dkey-16l2.16ENSDARG0000003796753
rab35b / RAB35, member RAS oncogene family b / RAB35* / Q6PHN9* / Q15286* / RAB35, member RAS oncogene family*ENSDARG0000005842553
CABZ01072548.1 / RAB35* / Q15286* / RAB35, member RAS oncogene family*ENSDARG0000010207851
rab30 / RAB30, member RAS oncogene family / Q15771* / Q923S9*ENSDARG0000003788445
rab43 / RAB43, member RAS oncogene family / Q86YS6* / Q8CG50*ENSDARG0000005940443
zgc:101559ENSDARG0000000325740
rab33ba / RAB33B, member RAS oncogene family a / RAB33B* / O35963* / Q9H082* / RAB33B, member RAS oncogene family*ENSDARG0000005229040
RAB19 (1 of many) / RAB19, member RAS oncogene family / RAB19* / A4D1S5* / P35294* / Ras-related protein Rab-19 *ENSDARG0000010115040
rab40b / RAB40B, member RAS oncogene family / Q12829* / RAB40A* / Q8WXH6* / P0C0E4* / RAB40AL* / RAB40A like* / RAB40A, member RAS oncogene family*ENSDARG0000004241039
rab33a / RAB33A, member RAS oncogene family / P97950* / Q14088*ENSDARG0000005739439
rab40c / RAB40c, member RAS oncogene family / Q8VHQ4* / Q96S21*ENSDARG0000006120838
CABZ01072885.1 / RAB26* / Q9ULW5* / RAB26, member RAS oncogene family*ENSDARG0000010425934


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IBA
 cellular_componentGO:0000139 Golgi membrane IBA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IBA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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