ENSDARG00000056491


Danio rerio

Features
Gene ID: ENSDARG00000056491
  
Biological name :ikzf5
  
Synonyms : IKAROS family zinc finger 5 / ikzf5 / Q6DBW0
  
Possible biological names infered from orthology : Q8BU00 / Q9H5V7 / Zinc finger protein Pegasus
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 21760032
Gene end: 21822840
  
Corresponding Affymetrix probe sets: Dr.25707.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000113181
Ensembl peptide - ENSDARP00000147344
Ensembl peptide - ENSDARP00000146647
Ensembl peptide - ENSDARP00000121409
Ensembl peptide - ENSDARP00000073468
Ensembl peptide - ENSDARP00000109784
Ensembl peptide - ENSDARP00000112682
NCBI entrez gene - 402893     See in Manteia.
RefSeq - NM_205601
RefSeq - XM_009293021
RefSeq Peptide - NP_991164
swissprot - Q6DBW0
swissprot - E9QGW3
swissprot - E9QD46
swissprot - E9QBJ4
ZFIN ID - ZDB-GENE-040801-209
Ensembl - ENSDARG00000056491
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 IKZF5ENSGALG00000032289Gallus gallus
 IKZF5ENSG00000095574Homo sapiens
 Ikzf5ENSMUSG00000040167Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
IKZF4 / si:dkey-166n8.9 / Q8C208* / Q9H2S9* / IKAROS family zinc finger 4* / Mus musculus IKAROS family zinc finger 4 (Ikzf4), transcript variant 3, mRNA.*ENSDARG0000003706822
ikzf1 / IKAROS family zinc finger 1 (Ikaros) / Q13422* / IKAROS family zinc finger 1*ENSDARG0000001353921
IKZF2 / si:zfos-1425h8.1 / P81183* / Q9UKS7* / IKAROS family zinc finger 2* / Zinc finger protein Helios *ENSDARG0000006911121


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003140 determination of left/right asymmetry in lateral mesoderm IMP
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007368 determination of left/right symmetry IMP
 biological_processGO:0035469 determination of pancreatic left/right asymmetry IMP
 biological_processGO:0071908 determination of intestine left/right asymmetry IMP
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000112 gut gut mislocalised , abnormal
Show

 ZFA:0000140 pancreas pancreas mislocalised , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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