ENSDARG00000056590


Danio rerio

Features
Gene ID: ENSDARG00000056590
  
Biological name :calca
  
Synonyms : calca / calcitonin/calcitonin-related polypeptide, alpha
  
Possible biological names infered from orthology : CALCB / calcitonin related polypeptide beta / P10092
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 27680556
Gene end: 27696958
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000073567
Ensembl peptide - ENSDARP00000091761
Ensembl peptide - ENSDARP00000142837
Ensembl peptide - ENSDARP00000146756
NCBI entrez gene - 436744     See in Manteia.
RefSeq - XM_005172267
RefSeq - NM_001002471
RefSeq Peptide - NP_001002471
swissprot - F1QIK6
swissprot - Q6DGJ9
ZFIN ID - ZDB-GENE-040718-173
Ensembl - ENSDARG00000056590
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CALCBENSG00000175868Homo sapiens
 CalcbENSMUSG00000030666Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001693  Calcitonin peptide-like
 IPR015476  Calcitonin gene-related peptide
 IPR018360  Calcitonin, conserved site
 IPR021116  Calcitonin/adrenomedullin
 IPR021117  Calcitonin-like
 IPR021118  Calcitonin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010469 regulation of signaling receptor activity IEA
 biological_processGO:0055064 chloride ion homeostasis IMP
 biological_processGO:0055074 calcium ion homeostasis IMP
 cellular_componentGO:0005576 extracellular region IEA
 molecular_functionGO:0005179 hormone activity IEA


Pathways (from Reactome)
Pathway description
G alpha (s) signalling events
Calcitonin-like ligand receptors


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000368 integument integument has extra parts of type NCC ionocyte , abnormal
Show

 ZFA:0001094 whole organism whole organism increased amount , abnormal
whole organism decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000056704 zgc:91818 / RAMP1* / Q9WTJ5* / O60894* / receptor activity modifying protein 1* / receptor (calcitonin) activity modifying protein 1*  / complex / reaction
 ENSDARG00000011571 calcrlb / calcitonin receptor-like b / CALCRL* / Q16602* / Q9R1W5* / calcitonin receptor like receptor* / Calcitonin-related peptide type 1 receptor *  / complex / reaction






 

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