ENSDARG00000056640


Danio rerio
isomeraserpiatyperibose-ribosesubgroupd-ribosemetabolicprocesspentose-phosphateshuntnon-oxidativebranchintracellularmembrane-boundedorganelleactivitypentosephosphatepathway

Features
Gene ID: ENSDARG00000056640
  
Biological name :rpia
  
Synonyms : ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase) / rpia
  
Possible biological names infered from orthology : P47968 / P49247 / Ribose-5-phosphate isomerase / ribose 5-phosphate isomerase A
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 13930263
Gene end: 13944288
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000073610
swissprot - B8JI15
ZFIN ID - ZDB-GENE-041114-24
Ensembl - ENSDARG00000056640
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RPIAENSGALG00000015960Gallus gallus
 RPIAENSG00000153574Homo sapiens
 RpiaENSMUSG00000053604Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004788  Ribose 5-phosphate isomerase, type A
 IPR020672  Ribose-5-phosphate isomerase, type A, subgroup


Gene Ontology (GO)
primary metabolic processsmall molecule metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processsmall molecule metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processsmall molecule metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processsmall molecule metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processsmall molecule metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processsmall molecule metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processsmall molecule metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processsmall molecule metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processsmall molecule metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processsmall molecule metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processprimary metabolic processsmall molecule metabolic prosmall molecule metabolic processorganic substance metabolic organic substance metabolic processnitrogen compound metabolic nitrogen compound metabolic processcellular metabolic processcellular metabolic process
isomerase activityisomerase activityisomerase activityisomerase activityisomerase activityisomerase activityisomerase activityisomerase activityisomerase activityisomerase activityisomerase activityisomerase activity
cellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellcellorganelleorganelle
TypeGO IDTermEv.Code
 biological_processGO:0006014 D-ribose metabolic process IBA
 biological_processGO:0009052 pentose-phosphate shunt, non-oxidative branch IBA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IBA
 molecular_functionGO:0004751 ribose-5-phosphate isomerase activity IBA


Pathways (from Reactome)
Pathway description
Pentose phosphate pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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