ENSDARG00000056740


Danio rerio

Features
Gene ID: ENSDARG00000056740
  
Biological name :tmeff1b
  
Synonyms : tmeff1b / transmembrane protein with EGF-like and two follistatin-like domains 1b
  
Possible biological names infered from orthology : MSANTD3-TMEFF1 / MSANTD3-TMEFF1 readthrough / Mus musculus transmembrane protein with EGF-like and two follistatin-like domains 1 (Tmeff1), transcript variant 1, mRNA. / Q6PFE7 / Q8IYR6 / TMEFF1 / transmembrane protein with EGF like and two follistatin like domains 1
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 33708804
Gene end: 33756003
  
Corresponding Affymetrix probe sets: Dr.4444.1.S1_at (Zebrafish Array)   NM_001025301_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000073739
NCBI entrez gene - 553511     See in Manteia.
RefSeq - NM_001025301
RefSeq Peptide - NP_001020472
swissprot - F1QSU6
ZFIN ID - ZDB-GENE-050706-143
Ensembl - ENSDARG00000056740
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000013212Gallus gallus
 MSANTD3-TMEFF1ENSG00000251349Homo sapiens
 Q8IYR6ENSG00000241697Homo sapiens
 Q6PFE7ENSMUSG00000028347Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tmeff1a / transmembrane protein with EGF-like and two follistatin-like domains 1a / TMEFF1* / Q6PFE7* / Q8IYR6* / MSANTD3-TMEFF1* / MSANTD3-TMEFF1 readthrough* / transmembrane protein with ...ENSDARG0000000819143
tmeff2a / transmembrane protein with EGF-like and two follistatin-like domains 2a / Q9UIK5* / TMEFF2* / Q9QYM9* / Tomoregulin-2 * / transmembrane protein with EGF like and two follistatin l...ENSDARG0000005182441
tmeff2b / transmembrane protein with EGF-like and two follistatin-like domains 2b / Q9UIK5* / TMEFF2* / Q9QYM9* / Tomoregulin-2 * / transmembrane protein with EGF like and two follistatin l...ENSDARG0000005869940


Protein motifs (from Interpro)
Interpro ID Name
 IPR000742  EGF-like domain
 IPR002350  Kazal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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