ENSDARG00000056743


Danio rerio

Features
Gene ID: ENSDARG00000056743
  
Biological name :cavin4b
  
Synonyms : caveolae associated protein 4b / cavin4b
  
Possible biological names infered from orthology : A2AMM0 / caveolae associated protein 4 / CAVIN4 / Q5BKX8
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 33697130
Gene end: 33703504
  
Corresponding Affymetrix probe sets: Dr.22841.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000073748
swissprot - F1QSU0
ZFIN ID - ZDB-GENE-041212-87
Ensembl - ENSDARG00000056743
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CAVIN4ENSGALG00000026452Gallus gallus
 CAVIN4ENSG00000170681Homo sapiens
 A2AMM0ENSMUSG00000028348Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cavin4a / caveolae associated protein 4a / CAVIN4* / A2AMM0* / Q5BKX8* / caveolae associated protein 4*ENSDARG0000003865852
cavin2b / caveolae associated protein 2b / Q969G5* / CAVIN2* / CAVIN3* / Q63918* / Q91VJ2* / O95810* / caveolae associated protein 3* / caveolae associated protein 2*ENSDARG0000007119632
cavin2a / caveolae associated protein 2a / Q969G5* / CAVIN2* / CAVIN3* / Q63918* / Q91VJ2* / O95810* / caveolae associated protein 3* / caveolae associated protein 2*ENSDARG0000002761130
cavin1b / caveolae associated protein 1b / CAVIN1* / O54724* / Q6NZI2* / caveolae associated protein 1*ENSDARG0000005936230
cavin1a / caveolae associated protein 1a / CAVIN1* / O54724* / Q6NZI2* / caveolae associated protein 1*ENSDARG0000007641129


Protein motifs (from Interpro)
Interpro ID Name
 IPR026752  Cavin family
 IPR033299  Caveolae-associated protein 4


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0033292 T-tubule organization IMP
 biological_processGO:0035023 regulation of Rho protein signal transduction IEA
 biological_processGO:0048741 skeletal muscle fiber development IMP
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000242 male organism male organism decreased length , abnormal
male organism decreased mass , abnormal
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 ZFA:0000303 female organism female organism decreased length , abnormal
female organism decreased mass , abnormal
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 ZFA:0005277 skeletal muscle skeletal muscle degenerate , abnormal
skeletal muscle increased amount , abnormal
skeletal muscle decreased amount , abnormal
skeletal muscle ERK1 and ERK2 cascade occurrence , abnormal
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 ZFA:0009115 skeletal muscle cell skeletal muscle cell decreased diameter , abnormal
skeletal muscle cell increased variability of size , abnormal
skeletal muscle cell irregularly shaped , abnormal
skeletal muscle cell cytoplasm increased amount , abnormal
skeletal muscle cell cytoplasm mislocalised , abnormal
skeletal muscle cell cytoplasm decreased amount , abnormal
skeletal muscle cell has extra parts of type skeletal muscle cell caveola, abnormal
skeletal muscle cell sarcomere spatial pattern , abnormal
skeletal muscle cell T-tubule malformed , abnormal
skeletal muscle cell T-tubule organization decreased process quality , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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