ENSDARG00000056784


Danio rerio

Features
Gene ID: ENSDARG00000056784
  
Biological name :aire
  
Synonyms : aire / autoimmune regulator
  
Possible biological names infered from orthology : O43918 / Q9Z0E3
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 22808946
Gene end: 22846553
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000114318
Ensembl peptide - ENSDARP00000114968
NCBI entrez gene - 100007662     See in Manteia.
RefSeq - NM_001110014
RefSeq Peptide - NP_001103484
swissprot - F1QIV0
swissprot - B8A5S8
ZFIN ID - ZDB-GENE-071008-4
Ensembl - ENSDARG00000056784
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AIREENSG00000160224Homo sapiens
 AireENSMUSG00000000731Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
phf12a / PHD finger protein 12a / PHF12* / Q5SPL2* / Q96QT6* / PHD finger protein 12*ENSDARG0000007430314
phf12b / PHD finger protein 12b / PHF12* / Q5SPL2* / Q96QT6* / PHD finger protein 12*ENSDARG0000007550912


Protein motifs (from Interpro)
Interpro ID Name
 IPR000770  SAND domain
 IPR001965  Zinc finger, PHD-type
 IPR004865  HSR domain
 IPR008087  Autoimmune regulator, AIRE
 IPR010919  SAND-like domain superfamily
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR019786  Zinc finger, PHD-type, conserved site
 IPR019787  Zinc finger, PHD-finger


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006417 regulation of translation IEA
 biological_processGO:0006959 humoral immune response IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0045182 translation regulator activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr