ENSDARG00000056871


Danio rerio

Features
Gene ID: ENSDARG00000056871
  
Biological name :ap4m1
  
Synonyms : adaptor-related protein complex 4, mu 1 subunit / ap4m1
  
Possible biological names infered from orthology : AP-4 complex subunit mu-1 / O00189 / Q9JKC7
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 22854803
Gene end: 22862078
  
Corresponding Affymetrix probe sets: Dr.13655.1.A1_at (Zebrafish Array)   NM_001002672_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000073893
NCBI entrez gene - 436945     See in Manteia.
RefSeq - NM_001002672
RefSeq Peptide - NP_001002672
swissprot - Q7SZZ7
ZFIN ID - ZDB-GENE-040718-421
Ensembl - ENSDARG00000056871
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AP4M1ENSG00000221838Homo sapiens
 Ap4m1ENSMUSG00000019518Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ap1m3 / adaptor-related protein complex 1, mu 3 subunitENSDARG0000003951231
ap1m2 / adaptor-related protein complex 1, mu 2 subunit / Q9Y6Q5*ENSDARG0000009645430
ap1m1 / adaptor-related protein complex 1, mu 1 subunit / Q9BXS5*ENSDARG0000009624929
Q6NWK2 / ap2m1a / ap2m1b / adaptor-related protein complex 2, mu 1 subunit, b / AP2M1* / Q96CW1* / P84091* / AP-2 complex subunit mu * / adaptor related protein complex 2 mu 1 subunit*ENSDARG0000000279026
ap2m1b / adaptor-related protein complex 2, mu 1 subunit, b / AP2M1* / Q96CW1* / P84091* / AP-2 complex subunit mu * / adaptor related protein complex 2 mu 1 subunit*ENSDARG0000003389926
ap3m2 / adaptor-related protein complex 3, mu 2 subunit / P53677* / Q8R2R9* / AP-3 complex subunit mu-2 *ENSDARG0000001612821
ap3m1 / adaptor-related protein complex 3, mu 1 subunit / Q9JKC8* / Q9Y2T2* / AP-3 complex subunit mu-1 *ENSDARG0000002992821
LO018011.1 / AP1M2* / Q9Y6Q5* / adaptor related protein complex 1 mu 2 subunit*ENSDARG0000011393216


Protein motifs (from Interpro)
Interpro ID Name
 IPR001392  Clathrin adaptor, mu subunit
 IPR011012  Longin-like domain superfamily
 IPR022775  AP complex, mu/sigma subunit
 IPR028565  Mu homology domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030131 clathrin adaptor complex IEA


Pathways (from Reactome)
Pathway description
Lysosome Vesicle Biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000054220 ap4s1 / adaptor-related protein complex 4, sigma 1 subunit / Q9WVL1* / Q9Y587* / AP-4 complex subunit sigma-1 *  / complex
 ENSDARG00000103684 ap4e1 / adaptor-related protein complex 4, epsilon 1 subunit / Q80V94* / Q9UPM8* / AP-4 complex subunit epsilon-1 *  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr