ENSDARG00000056978


Danio rerio

Features
Gene ID: ENSDARG00000056978
  
Biological name :letm1
  
Synonyms : letm1 / leucine zipper-EF-hand containing transmembrane protein 1 / Q1LY46
  
Possible biological names infered from orthology : leucine zipper and EF-hand containing transmembrane protein 1 / Mitochondrial proton/calcium exchanger protein / O95202 / Q9Z2I0
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 13033424
Gene end: 13099800
  
Corresponding Affymetrix probe sets: Dr.25343.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000074011
Ensembl peptide - ENSDARP00000131431
swissprot - A0A0R4IDC7
swissprot - Q1LY46
ZFIN ID - ZDB-GENE-050522-154
Ensembl - ENSDARG00000056978
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LETM1ENSGALG00000015706Gallus gallus
 LETM1ENSG00000168924Homo sapiens
 Letm1ENSMUSG00000005299Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
letm2 / leucine zipper-EF-hand containing transmembrane protein 2 / Q7TNU7* / Q2VYF4* / LETM1 domain-containing protein LETM2, mitochondrial * / leucine zipper and EF-hand containing transm...ENSDARG0000007751529


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011685  LETM1-like
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site
 IPR033122  Letm1 ribosome-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006816 calcium ion transport IEA
 biological_processGO:0006851 mitochondrial calcium ion transmembrane transport ISS
 biological_processGO:0006875 cellular metal ion homeostasis IBA
 biological_processGO:0034214 protein hexamerization ISS
 biological_processGO:0051260 protein homooligomerization ISS
 biological_processGO:0051560 mitochondrial calcium ion homeostasis ISS
 biological_processGO:0099093 calcium export from the mitochondrion ISS
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005743 mitochondrial inner membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0015297 antiporter activity IEA
 molecular_functionGO:0015369 calcium:proton antiporter activity ISS
 molecular_functionGO:0043022 ribosome binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr