ENSDARG00000057110


Danio rerio

Features
Gene ID: ENSDARG00000057110
  
Biological name :slc25a1a
  
Synonyms : slc25a1a / solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1a
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 23060391
Gene end: 23069323
  
Corresponding Affymetrix probe sets: Dr.13990.1.A1_at (Zebrafish Array)   NM_200607_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000074163
NCBI entrez gene - 393579     See in Manteia.
RefSeq - NM_200607
RefSeq Peptide - NP_956901
swissprot - Q6PGY3
ZFIN ID - ZDB-GENE-040426-1172
Ensembl - ENSDARG00000057110
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc25a1b / slc25a1 solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1b / P53007* / SLC25A1* / solute carrier family 25 member 1*ENSDARG0000007638165
si:dkey-178e17.1 / Q8JZU2* / P53007* / SLC25A1* / solute carrier family 25 member 1* / Tricarboxylate transport protein, mitochondrial *ENSDARG0000008000053


Protein motifs (from Interpro)
Interpro ID Name
 IPR018108  Mitochondrial substrate/solute carrier
 IPR023395  Mitochondrial carrier domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006839 mitochondrial transport IBA
 biological_processGO:0006843 mitochondrial citrate transmembrane transport IBA
 biological_processGO:0010821 regulation of mitochondrion organization IMP
 cellular_componentGO:0005743 mitochondrial inner membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 molecular_functionGO:0015137 citrate transmembrane transporter activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain decreased size , abnormal
Show

 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0000107 eye eye decreased size , abnormal
Show

 ZFA:0000114 heart heart decreased size , abnormal
Show

 ZFA:0000217 inner ear inner ear decreased size , abnormal
Show

 ZFA:0001094 whole organism whole organism dead , abnormal
whole organism mitochondrial chromosome decreased amount , abnormal
Show

 ZFA:0001114 head head flattened , abnormal
head dorsal-ventral axis decreased length , abnormal
Show

 ZFA:0001227 mandibular arch skeleton mandibular arch skeleton decreased size , abnormal
Show

 ZFA:0001338 intestine intestine decreased size , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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