ENSDARG00000057491


Danio rerio

Features
Gene ID: ENSDARG00000057491
  
Biological name :n4bp1
  
Synonyms : n4bp1 / nedd4 binding protein 1 / Q1LVK9
  
Possible biological names infered from orthology : O75113 / Q6A037
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 18405992
Gene end: 18422543
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000074624
NCBI entrez gene - 327327     See in Manteia.
RefSeq - NM_199787
RefSeq Peptide - NP_956081
swissprot - Q1LVK9
ZFIN ID - ZDB-GENE-030131-5538
Ensembl - ENSDARG00000057491
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 N4BP1ENSGALG00000003907Gallus gallus
 N4BP1ENSG00000102921Homo sapiens
 N4bp1ENSMUSG00000031652Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
khnyn / KH and NYN domain containing / Q9P2P1* / NYNRIN* / O15037* / NYN domain and retroviral integrase containing*ENSDARG0000009248828
zc3h12b / zinc finger CCCH-type containing 12B / Q5HYM0*ENSDARG0000006246315
si:dkey-206d17.12 / Q5D1E7* / Q5D1E8* / ZC3H12A* / zinc finger CCCH-type containing 12A*ENSDARG0000010103415
zc3h12a / zinc finger CCCH-type containing 12A / Q5D1E7* / Q5D1E8*ENSDARG0000000527113


Protein motifs (from Interpro)
Interpro ID Name
 IPR004088  K Homology domain, type 1
 IPR021869  Ribonuclease Zc3h12a-like, NYN domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0031397 negative regulation of protein ubiquitination ISS
 biological_processGO:0032435 negative regulation of proteasomal ubiquitin-dependent protein catabolic process ISS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus ISS
 cellular_componentGO:0016605 PML body ISS
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr