ENSDARG00000057632


Danio rerio

Features
Gene ID: ENSDARG00000057632
  
Biological name :ppp1r42
  
Synonyms : ppp1r42 / protein phosphatase 1, regulatory subunit 42 / Q6GQN5
  
Possible biological names infered from orthology : Q7Z4L9 / Q8R1Z4
  
Species: Danio rerio
  
Chr. number: 24
Strand: 1
Band:
Gene start: 23730061
Gene end: 23740899
  
Corresponding Affymetrix probe sets: Dr.18801.1.A1_at (Zebrafish Array)   NM_001002202_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000074793
NCBI entrez gene - 431749     See in Manteia.
RefSeq - XM_017353821
RefSeq - NM_001002202
RefSeq Peptide - NP_001002202
swissprot - Q6GQN5
ZFIN ID - ZDB-GENE-040704-43
Ensembl - ENSDARG00000057632
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PPP1R42ENSGALG00000034424Gallus gallus
 Q7Z4L9ENSG00000178125Homo sapiens
 Q8R1Z4ENSMUSG00000025916Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010921 regulation of phosphatase activity IBA
 cellular_componentGO:0002177 manchette ISS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005813 centrosome ISS
 cellular_componentGO:0005815 microtubule organizing center ISS
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0015630 microtubule cytoskeleton ISS
 molecular_functionGO:0003779 actin binding ISS
 molecular_functionGO:0008092 cytoskeletal protein binding IBA
 molecular_functionGO:0015631 tubulin binding ISS
 molecular_functionGO:0070840 dynein complex binding ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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