ENSDARG00000058354


Danio rerio

Features
Gene ID: ENSDARG00000058354
  
Biological name :selenot1a
  
Synonyms : Q802F2 / selenoprotein T, 1a / selenot1a
  
Possible biological names infered from orthology : P62341 / P62342 / selenoprotein T / SELENOT / Thioredoxin reductase-like selenoprotein T
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 9684305
Gene end: 9696283
  
Corresponding Affymetrix probe sets: Dr.2952.1.S1_at (Zebrafish Array)   NM_178290_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000136996
NCBI entrez gene - 352919     See in Manteia.
RefSeq - NM_178290
RefSeq Peptide - NP_840075
swissprot - Q802F2
ZFIN ID - ZDB-GENE-030327-6
Ensembl - ENSDARG00000058354
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SELENOTENSGALG00000010399Gallus gallus
 P62341ENSG00000198843Homo sapiens
 P62342ENSMUSG00000075700Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6PHY8 / selenot1b / selenoprotein T, 1b / P62342* / P62341* / SELENOT* / selenoprotein T* / Thioredoxin reductase-like selenoprotein T *ENSDARG0000002759573
Q502K9 / selenot2 / selenoprotein T, 2ENSDARG0000002322048


Protein motifs (from Interpro)
Interpro ID Name
 IPR011893  Selenoprotein, Rdx-type
 IPR012336  Thioredoxin-like fold
 IPR019389  Selenoprotein T


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055114 oxidation-reduction process IEA
 biological_processGO:0098869 cellular oxidant detoxification IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004791 thioredoxin-disulfide reductase activity IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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