ENSDARG00000058710


Danio rerio

Features
Gene ID: ENSDARG00000058710
  
Biological name :terf1
  
Synonyms : telomeric repeat binding factor (NIMA-interacting) 1 / terf1
  
Possible biological names infered from orthology : P54274 / P70371 / telomeric repeat binding factor 1
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 13336327
Gene end: 13349802
  
Corresponding Affymetrix probe sets: Dr.25530.1.A1_at (Zebrafish Array)   Dr.25530.1.A1_s_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000135133
Ensembl peptide - ENSDARP00000118728
Ensembl peptide - ENSDARP00000120064
swissprot - A0A0G2KRV3
swissprot - F1QDP9
swissprot - F1QKQ7
ZFIN ID - ZDB-GENE-090612-2
Ensembl - ENSDARG00000058710
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TERF1ENSGALG00000037453Gallus gallus
 TERF1ENSG00000147601Homo sapiens
 Terf1ENSMUSG00000025925Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
terfa / telomeric repeat binding factor a / TERF2* / O35144* / Q15554* / telomeric repeat binding factor 2*ENSDARG0000003930219


Protein motifs (from Interpro)
Interpro ID Name
 IPR001005  SANT/Myb domain
 IPR009057  Homeobox-like domain superfamily
 IPR013867  Telomere repeat-binding factor, dimerisation domain
 IPR017930  Myb domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000723 telomere maintenance IEA
 biological_processGO:0031627 telomeric loop formation IBA
 cellular_componentGO:0000783 nuclear telomere cap complex IBA
 cellular_componentGO:0000784 nuclear chromosome, telomeric region IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003691 double-stranded telomeric DNA binding IBA
 molecular_functionGO:0042162 telomeric DNA binding IDA
 molecular_functionGO:0042803 protein homodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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