ENSDARG00000058839


Danio rerio

Features
Gene ID: ENSDARG00000058839
  
Biological name :susd1
  
Synonyms : susd1 / sushi domain containing 1
  
Possible biological names infered from orthology : Q6UWL2
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 9246018
Gene end: 9278521
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000141004
Ensembl peptide - ENSDARP00000146487
Ensembl peptide - ENSDARP00000144652
Ensembl peptide - ENSDARP00000076208
Ensembl peptide - ENSDARP00000076211
NCBI entrez gene - 569485     See in Manteia.
swissprot - E7FBP0
swissprot - A0A0J9YJK9
swissprot - F1QRX3
ZFIN ID - ZDB-GENE-060526-169
Ensembl - ENSDARG00000058839
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SUSD1ENSGALG00000015677Gallus gallus
 SUSD1ENSG00000106868Homo sapiens
 Susd1ENSMUSG00000038578Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-191c10.1ENSDARG000000979934


Protein motifs (from Interpro)
Interpro ID Name
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000436  Sushi/SCR/CCP domain
 IPR000742  EGF-like domain
 IPR001881  EGF-like calcium-binding domain
 IPR003961  Fibronectin type III
 IPR009030  Growth factor receptor cysteine-rich domain superfamily
 IPR013032  EGF-like, conserved site
 IPR013783  Immunoglobulin-like fold
 IPR018097  EGF-like calcium-binding, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr