ENSDARG00000058984


Danio rerio

Features
Gene ID: ENSDARG00000058984
  
Biological name :rad23ab
  
Synonyms : rad23ab / RAD23 homolog A, nucleotide excision repair protein b
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 4745105
Gene end: 4760187
  
Corresponding Affymetrix probe sets: Dr.19691.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000076407
swissprot - Q1L8N2
ZFIN ID - ZDB-GENE-051113-160
Ensembl - ENSDARG00000058984
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rad23b / RAD23 homolog B, nucleotide excision repair protein / P54727*ENSDARG0000002155057
rad23aa / RAD23 homolog A, nucleotide excision repair protein a / RAD23A* / P54725* / P54726* / RAD23 homolog A, nucleotide excision repair protein*ENSDARG0000002000151


Protein motifs (from Interpro)
Interpro ID Name
 IPR000626  Ubiquitin domain
 IPR004806  UV excision repair protein Rad23
 IPR006636  Heat shock chaperonin-binding
 IPR009060  UBA-like superfamily
 IPR015360  XPC-binding domain
 IPR015940  Ubiquitin-associated domain
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006289 nucleotide-excision repair IEA
 biological_processGO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003684 damaged DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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