ENSDARG00000059556


Danio rerio

Features
Gene ID: ENSDARG00000059556
  
Biological name :recql5
  
Synonyms : RecQ helicase-like 5 / recql5
  
Possible biological names infered from orthology : ATP-dependent DNA helicase Q5 / O94762 / Q8VID5 / RecQ like helicase 5
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 59986120
Gene end: 60027308
  
Corresponding Affymetrix probe sets: Dr.25449.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000127973
Ensembl peptide - ENSDARP00000148258
NCBI entrez gene - 566553     See in Manteia.
swissprot - X1WCM8
ZFIN ID - ZDB-GENE-071214-1
Ensembl - ENSDARG00000059556
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RECQL5ENSGALG00000002424Gallus gallus
 O94762ENSG00000108469Homo sapiens
 Q8VID5ENSMUSG00000020752Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
blm / Bloom syndrome, RecQ helicase-like / P54132* / O88700* / Bloom syndrome protein homolog * / Bloom syndrome RecQ like helicase*ENSDARG0000007708924
wrn / Werner syndrome / O09053* / Q14191* / Werner syndrome RecQ like helicase*ENSDARG0000009821119
recql / RecQ helicase-like / Q9Z129* / P46063* / RecQ protein-like* / RecQ like helicase*ENSDARG0000000717518
recql4 / RecQ helicase-like 4 / RecQ like helicase 4*ENSDARG0000007751617


Protein motifs (from Interpro)
Interpro ID Name
 IPR001650  Helicase, C-terminal
 IPR004589  DNA helicase, ATP-dependent, RecQ type
 IPR010716  RecQ helicase-like 5
 IPR011545  DEAD/DEAH box helicase domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR032284  ATP-dependent DNA helicase RecQ, zinc-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006310 DNA recombination IEA
 biological_processGO:0045950 negative regulation of mitotic recombination IMP
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008026 ATP-dependent helicase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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