ENSDARG00000059658


Danio rerio

Features
Gene ID: ENSDARG00000059658
  
Biological name :mrm1
  
Synonyms : mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae) / mrm1
  
Possible biological names infered from orthology : mitochondrial rRNA methyltransferase 1 / Q6IN84 / Q99J25 / rRNA methyltransferase 1, mitochondrial
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 56119975
Gene end: 56125769
  
Corresponding Affymetrix probe sets: Dr.15224.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000077572
NCBI entrez gene - 563095     See in Manteia.
RefSeq - NM_001326466
RefSeq Peptide - NP_001313395
swissprot - F1QG96
ZFIN ID - ZDB-GENE-060526-229
Ensembl - ENSDARG00000059658
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MRM1ENSGALG00000039523Gallus gallus
 MRM1ENSG00000278619Homo sapiens
 Mrm1ENSMUSG00000018405Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001537  tRNA/rRNA methyltransferase, SpoU type
 IPR004441  RNA methyltransferase TrmH family
 IPR029026  tRNA (guanine-N1-)-methyltransferase, N-terminal
 IPR029028  Alpha/beta knot methyltransferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000453 enzyme-directed rRNA 2"-O-methylation IBA
 biological_processGO:0006396 RNA processing IEA
 cellular_componentGO:0005739 mitochondrion IBA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0008173 RNA methyltransferase activity IEA
 molecular_functionGO:0070039 rRNA (guanosine-2"-O-)-methyltransferase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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