ENSDARG00000059682


Danio rerio
majorfacilitatormembraneslc43a3adomainsolutecarrierfamilymembertransmembranetransportnucleuscytoplasmintegralcomponentpronephroswholeorganismventricular

Features
Gene ID: ENSDARG00000059682
  
Biological name :slc43a3a
  
Synonyms : slc43a3a / solute carrier family 43, member 3a
  
Possible biological names infered from orthology : A2AVZ9 / AP000781.2 / Q8NBI5 / SLC43A3 / solute carrier family 43 member 3
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 44141758
Gene end: 44161417
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000130308
Ensembl peptide - ENSDARP00000077648
NCBI entrez gene - 572234     See in Manteia.
RefSeq - NM_001201344
RefSeq Peptide - NP_001188273
swissprot - E7F4C3
ZFIN ID - ZDB-GENE-110208-8
Ensembl - ENSDARG00000059682
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000020479Gallus gallus
 ENSGALG00000030316Gallus gallus
 AP000781.2ENSG00000254979Homo sapiens
 Q8NBI5ENSG00000134802Homo sapiens
 A2AVZ9ENSMUSG00000027074Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc43a3b / solute carrier family 43, member 3b / A2AVZ9* / Q8NBI5* / SLC43A3* / AP000781.2* / solute carrier family 43 member 3*ENSDARG0000005794962
slc43a2a / solute carrier family 43 (amino acid system L transporter), member 2a / Q8CGA3* / Q8N370* / SLC43A2* / solute carrier family 43 member 2*ENSDARG0000003684822
slc43a2b / solute carrier family 43 (amino acid system L transporter), member 2b / Q8CGA3* / Q8N370* / SLC43A2* / solute carrier family 43 member 2*ENSDARG0000006112022
slc43a1a / solute carrier family 43 (amino acid system L transporter), member 1a / O75387* / Q8BSM7* / SLC43A1* / solute carrier family 43 member 1*ENSDARG0000003739321
slc43a1b / solute carrier family 43 (amino acid system L transporter), member 1b / O75387* / Q8BSM7* / SLC43A1* / solute carrier family 43 member 1*ENSDARG0000003774820


Protein motifs (from Interpro)
Interpro ID Name
 IPR011701  Major facilitator superfamily
 IPR020846  Major facilitator superfamily domain
 IPR027197  Solute carrier family 43 member 3


Gene Ontology (GO)
establishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localization
cellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellcellorganelleorganellemembranemembrane
TypeGO IDTermEv.Code
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000151 pronephros pronephros cystic , abnormal
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 ZFA:0001094 whole organism whole organism anterior-posterior axis curved , abnormal
Show

 ZFA:0001261 ventricular system ventricular system hydrocephalic , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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