ENSDARG00000059707


Danio rerio

Features
Gene ID: ENSDARG00000059707
  
Biological name :ZNF423
  
Synonyms : A1L1R6 / si:ch211-216l23.1 / ZNF423
  
Possible biological names infered from orthology : Q2M1K9 / Q80TS5 / Zfp423 / zinc finger protein 423
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 17786548
Gene end: 17997474
  
Corresponding Affymetrix probe sets: Dr.16247.1.A1_at (Zebrafish Array)   NM_001080030_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000155264
Ensembl peptide - ENSDARP00000156375
Ensembl peptide - ENSDARP00000077731
Ensembl peptide - ENSDARP00000118324
Ensembl peptide - ENSDARP00000144947
Ensembl peptide - ENSDARP00000145409
Ensembl peptide - ENSDARP00000146416
NCBI entrez gene - 566696     See in Manteia.
RefSeq - NM_001080030
RefSeq Peptide - NP_001073499
swissprot - A1L1R6
swissprot - Z4YIT3
ZFIN ID - ZDB-GENE-060503-121
Ensembl - ENSDARG00000059707
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ZNF423ENSGALG00000003891Gallus gallus
 Q2M1K9ENSG00000102935Homo sapiens
 Q80TS5ENSMUSG00000045333Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LO018191.1ENSDARG0000011676947
znf521 / zinc finger protein 521 / Q6KAS7* / Q96K83* / Zfp521*ENSDARG0000008682524
znf423 / zinc finger protein 423 / Q2M1K9* / Q80TS5* / Zfp423*ENSDARG000000957327


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0008150 biological_process ND
 biological_processGO:0030154 cell differentiation IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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