ENSDARG00000059866


Danio rerio

Features
Gene ID: ENSDARG00000059866
  
Biological name :cactin
  
Synonyms : cactin / F1Q8W0
  
Possible biological names infered from orthology : cactin, spliceosome C complex subunit / Q8WUQ7 / Q9CS00
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 49608796
Gene end: 49627103
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000078145
Ensembl peptide - ENSDARP00000121996
NCBI entrez gene - 100126813     See in Manteia.
RefSeq - XM_005168431
RefSeq - XM_005168432
swissprot - F1Q8W0
swissprot - E9QDZ9
ZFIN ID - ZDB-GENE-060503-322
Ensembl - ENSDARG00000059866
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CACTINENSGALG00000024391Gallus gallus
 CACTINENSG00000105298Homo sapiens
 CactinENSMUSG00000034889Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR018816  Cactin, central domain
 IPR019134  Cactin, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001654 eye development IMP
 biological_processGO:0002376 immune system process IEA
 biological_processGO:0003407 neural retina development IMP
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0008595 anterior/posterior axis specification, embryo IMP
 biological_processGO:0040019 positive regulation of embryonic development IMP
 biological_processGO:0045087 innate immune response IEA
 cellular_componentGO:0005634 nucleus IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000046 retinal neural layer retinal neural layer stratification , abnormal
Show

 ZFA:0000107 eye eye decreased size , abnormal
eye apoptotic , abnormal
eye spherical , abnormal
Show

 ZFA:0001027 oral cavity oral cavity decreased size , abnormal
Show

 ZFA:0001094 whole organism whole organism viability , abnormal
whole organism decreased length , abnormal
whole organism bent , abnormal
Show

 ZFA:0001114 head head circular , abnormal
Show

 ZFA:0001117 post-vent region post-vent region decreased length , abnormal
Show

 ZFA:0001466 photoreceptor outer segment layer photoreceptor outer segment layer disheveled , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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