ENSDARG00000060210


Danio rerio

Features
Gene ID: ENSDARG00000060210
  
Biological name :d2hgdh
  
Synonyms : d2hgdh / D-2-hydroxyglutarate dehydrogenase
  
Possible biological names infered from orthology : D-2-hydroxyglutarate dehydrogenase, mitochondrial / Q8CIM3 / Q8N465
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 41546271
Gene end: 41562868
  
Corresponding Affymetrix probe sets: Dr.16884.1.A1_at (Zebrafish Array)   NM_001080597_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000079032
NCBI entrez gene - 565889     See in Manteia.
RefSeq - NM_001080597
RefSeq Peptide - NP_001074066
swissprot - F1R1R3
ZFIN ID - ZDB-GENE-070112-482
Ensembl - ENSDARG00000060210
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 D2HGDHENSGALG00000039535Gallus gallus
 D2HGDHENSG00000180902Homo sapiens
 D2hgdhENSMUSG00000073609Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004113  FAD-linked oxidase, C-terminal
 IPR006094  FAD linked oxidase, N-terminal
 IPR016164  FAD-linked oxidase-like, C-terminal
 IPR016166  FAD-binding, type 2
 IPR016167  FAD-binding, type 2, subdomain 1
 IPR016171  Vanillyl-alcohol oxidase, C-terminal subdomain 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055114 oxidation-reduction process IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA
 molecular_functionGO:0050660 flavin adenine dinucleotide binding IEA


Pathways (from Reactome)
Pathway description
Interconversion of 2-oxoglutarate and 2-hydroxyglutarate


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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