ENSDARG00000060393


Danio rerio

Features
Gene ID: ENSDARG00000060393
  
Biological name :fibcd1
  
Synonyms : fibcd1 / fibrinogen C domain containing 1
  
Possible biological names infered from orthology : A2AV25 / Fibrinogen C domain-containing protein 1 / Q8N539
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 34066591
Gene end: 34185497
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000117492
Ensembl peptide - ENSDARP00000155651
NCBI entrez gene - 567525     See in Manteia.
swissprot - A5PMA3
ZFIN ID - ZDB-GENE-070424-245
Ensembl - ENSDARG00000060393
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FIBCD1ENSGALG00000003866Gallus gallus
 FIBCD1ENSG00000130720Homo sapiens
 A2AV25ENSMUSG00000026841Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkeyp-51b7.3 / FIBCD1 (1 of many) / A2AV25* / FIBCD1* / Q8N539* / fibrinogen C domain containing 1* / Fibrinogen C domain-containing protein 1 *ENSDARG0000007464028
angptl2b / angiopoietin-like 2bENSDARG0000006836926
angptl1a / angiopoietin-like 1a / Q640P2* / O95841* / ANGPTL1* / angiopoietin like 1* / Angiopoietin-related protein 1 *ENSDARG0000001207125
angptl6 / angiopoietin-like 6 / Q8NI99*ENSDARG0000002026525
angptl2a / angiopoietin-like 2aENSDARG0000002403025
angpt1 / angiopoietin 1 / O08538* / Q15389*ENSDARG0000003036424
angptl1b / angiopoietin-like 1b / O95841* / ANGPTL1* / angiopoietin like 1*ENSDARG0000010015924
fgl2b / fibrinogen-like 2b / FGL2* / P12804* / Q14314* / Fibroleukin * / fibrinogen like 2*ENSDARG0000001968623
si:ch211-203k16.3ENSDARG0000006930523
angpt4 / angiopoietin 4 / Q9Y264*ENSDARG0000007678723
zgc:173915 / si:zfos-2330d3.3 / MFAP4 (1 of many) / MFAP4* / P55083* / Q9D1H9* / microfibril associated protein 4* / Microfibril-associated glycoprotein 4 *ENSDARG0000008966723
MFAP4 (1 of many) / si:ch1073-110a20.7 / MFAP4* / P55083* / Q9D1H9* / microfibril associated protein 4* / Microfibril-associated glycoprotein 4 *ENSDARG0000009055723
mfap4 / microfibril associated protein 4 / P55083* / Q9D1H9* / Microfibril-associated glycoprotein 4 *ENSDARG0000009078323
zmp:0000001323 / si:zfos-2330d3.7 / MFAP4 (1 of many) / MFAP4* / P55083* / Q9D1H9* / microfibril associated protein 4* / Microfibril-associated glycoprotein 4 *ENSDARG0000009484523
si:ch1073-110a20.3 / MFAP4* / Q9D1H9* / P55083* / microfibril associated protein 4* / Microfibril-associated glycoprotein 4 *ENSDARG0000009658623
angpt2a / angiopoietin 2a / ANGPT2* / O15123* / O35608* / angiopoietin 2*ENSDARG0000001494622
fgl2a / fibrinogen-like 2a / FGL2* / P12804* / Q14314* / Fibroleukin * / fibrinogen like 2*ENSDARG0000001986122
wu:fj11g02 / si:zfos-2330d3.1 / MFAP4 (1 of many) / MFAP4* / P55083* / Q9D1H9* / microfibril associated protein 4* / Microfibril-associated glycoprotein 4 *ENSDARG0000003868122
si:zfos-2330d3.1 / MFAP4 (1 of many) / si:ch1073-110a20.2 / MFAP4* / P55083* / Q9D1H9* / microfibril associated protein 4* / Microfibril-associated glycoprotein 4 *ENSDARG0000003868322
angpt2b / angiopoietin 2bENSDARG0000005390622


Protein motifs (from Interpro)
Interpro ID Name
 IPR002181  Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
 IPR014715  Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2
 IPR014716  Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1
 IPR020837  Fibrinogen, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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