ENSDARG00000060671


Danio rerio

Features
Gene ID: ENSDARG00000060671
  
Biological name :lct
  
Synonyms : lactase / lct
  
Possible biological names infered from orthology : P09848
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 46369932
Gene end: 46399611
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000132225
Ensembl peptide - ENSDARP00000080173
NCBI entrez gene - 559107     See in Manteia.
RefSeq - XM_021479024
swissprot - F1Q8B5
swissprot - A0A0G2KIT0
ZFIN ID - ZDB-GENE-081104-434
Ensembl - ENSDARG00000060671
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LCTENSGALG00000012260Gallus gallus
 LCTENSG00000115850Homo sapiens
 LctENSMUSG00000026354Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-79p17.3 / LCT* / P09848* / lactase*ENSDARG0000009240477
kl / klotho / O35082* / Q9UEF7* / Klotho Klotho peptide*ENSDARG0000007986220
klb / klotho beta / Q86Z14* / Q99N32* / Beta-klotho *ENSDARG0000007629417
lctlb / lactase-like b / LCTL* / Q6UWM7* / lactase like*ENSDARG0000001633713
lctla / lactase-like a / LCTL* / Q6UWM7* / Q8K1F9* / lactase like* / Lactase-like protein *ENSDARG0000003613912
gba3 / glucosidase, beta, acid 3 (gene/pseudogene) / glucosylceramidase beta 3 (gene/pseudogene)*ENSDARG0000003115010


Protein motifs (from Interpro)
Interpro ID Name
 IPR001360  Glycoside hydrolase family 1
 IPR017853  Glycoside hydrolase superfamily
 IPR018120  Glycoside hydrolase family 1, active site
 IPR033132  Glycosyl hydrolases family 1, N-terminal conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:1901657 glycosyl compound metabolic process IBA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000016 lactase activity IBA
 molecular_functionGO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA
 molecular_functionGO:0008422 beta-glucosidase activity IBA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016798 hydrolase activity, acting on glycosyl bonds IEA


Pathways (from Reactome)
Pathway description
Digestion of dietary carbohydrate


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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