ENSDARG00000060853


Danio rerio

Features
Gene ID: ENSDARG00000060853
  
Biological name :nckap1
  
Synonyms : B0S6R1 / nckap1 / NCK-associated protein 1
  
Possible biological names infered from orthology : Mus musculus NCK-associated protein 1 (Nckap1), transcript variant 4, mRNA. / P28660 / Q9Y2A7
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 44721808
Gene end: 44825419
  
Corresponding Affymetrix probe sets: Dr.22018.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000156716
Ensembl peptide - ENSDARP00000080611
Ensembl peptide - ENSDARP00000116328
Ensembl peptide - ENSDARP00000119512
NCBI entrez gene - 561894     See in Manteia.
RefSeq - XM_005167921
RefSeq - XM_005167924
RefSeq - NM_001137665
RefSeq - XM_005167923
RefSeq - XM_005167922
RefSeq Peptide - NP_001131137
swissprot - T1ECV5
swissprot - B0S6R1
ZFIN ID - ZDB-GENE-030131-4426
Ensembl - ENSDARG00000060853
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NCKAP1ENSGALG00000002750Gallus gallus
 NCKAP1ENSG00000061676Homo sapiens
 Nckap1ENSMUSG00000027002Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NCKAP1L / zgc:172352 / P55160* / NCK associated protein 1 like*ENSDARG0000007574854


Protein motifs (from Interpro)
Interpro ID Name
 IPR019137  Nck-associated protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0048812 neuron projection morphogenesis IMP
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031258 lamellipodium membrane IEA
 cellular_componentGO:0042995 cell projection IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Regulation of actin dynamics for phagocytic cup formation
VEGFA-VEGFR2 Pathway
RHO GTPases Activate WASPs and WAVEs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0009243 CaP motoneuron CaP motoneuron has fewer parts of type primary motor neuron neuron projection, abnormal
CaP motoneuron neuron projection decreased length , abnormal
CaP motoneuron neuron projection decreased branchiness , abnormal
CaP motoneuron collateral sprouting decreased process quality , abnormal
CaP motoneuron has fewer parts of type CaP motoneuron filopodium, abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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