ENSDARG00000061143


Danio rerio

Features
Gene ID: ENSDARG00000061143
  
Biological name :tapt1b
  
Synonyms : A2BIE7 / tapt1b / transmembrane anterior posterior transformation 1b
  
Possible biological names infered from orthology : Q4VBD2 / Q6NXT6 / TAPT1 / transmembrane anterior posterior transformation 1 / Transmembrane anterior posterior transformation protein 1
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 22770255
Gene end: 22803147
  
Corresponding Affymetrix probe sets: Dr.2271.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000081301
NCBI entrez gene - 559710     See in Manteia.
RefSeq - NM_001123250
RefSeq Peptide - NP_001116722
swissprot - A2BIE7
ZFIN ID - ZDB-GENE-030131-4025
Ensembl - ENSDARG00000061143
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TAPT1ENSGALG00000014486Gallus gallus
 TAPT1ENSG00000169762Homo sapiens
 Tapt1ENSMUSG00000046985Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tapt1a / transmembrane anterior posterior transformation 1a / TAPT1* / Q6NXT6* / Q4VBD2* / transmembrane anterior posterior transformation 1* / Transmembrane anterior posterior transformati...ENSDARG0000007399972


Protein motifs (from Interpro)
Interpro ID Name
 IPR008010  Tapt1 family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001503 ossification IMP
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0014032 neural crest cell development IMP
 biological_processGO:0030030 cell projection organization IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0045724 positive regulation of cilium assembly ISS
 biological_processGO:0051216 cartilage development IEA
 biological_processGO:0061036 positive regulation of cartilage development IMP
 biological_processGO:1903012 positive regulation of bone development IMP
 biological_processGO:1904888 cranial skeletal system development IMP
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005813 centrosome ISS
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005929 cilium IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0036064 ciliary basal body ISS
 cellular_componentGO:0042995 cell projection IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001216 splanchnocranium splanchnocranium immature , abnormal
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 ZFA:0001400 ceratohyal cartilage ceratohyal cartilage disorganized , abnormal
Show

 ZFA:0001458 cranial cartilage cranial cartilage malformed , abnormal
Show

 ZFA:0001516 ceratobranchial cartilage ceratobranchial cartilage disorganized , abnormal
ceratobranchial cartilage chondrocyte absent , abnormal
Show

 ZFA:0009003 cranial neural crest cell cranial neural crest cell disorganized , abnormal
cranial neural crest cell decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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