ENSDARG00000061647


Danio rerio

Features
Gene ID: ENSDARG00000061647
  
Biological name :nrxn1a
  
Synonyms : A1XQX0 / A1XQX1 / neurexin 1a / nrxn1a
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 24342303
Gene end: 24640339
  
Corresponding Affymetrix probe sets: Dr.19533.1.A1_at (Zebrafish Array)   NM_001080021_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000082592
Ensembl peptide - ENSDARP00000154048
Ensembl peptide - ENSDARP00000152871
Ensembl peptide - ENSDARP00000151175
Ensembl peptide - ENSDARP00000102322
Ensembl peptide - ENSDARP00000087526
Ensembl peptide - ENSDARP00000082611
Ensembl peptide - ENSDARP00000056255
NCBI entrez gene - 565531     See in Manteia.
RefSeq - NM_001080021
RefSeq - NM_001346923
RefSeq - XM_005156209
RefSeq - XM_021480137
RefSeq Peptide - NP_001073490
RefSeq Peptide - NP_001333852
swissprot - E7F5N4
swissprot - E7F420
swissprot - B6EUL5
swissprot - A1XQX1
swissprot - A1XQX0
swissprot - A0A140TAU1
ZFIN ID - ZDB-GENE-070206-1
Ensembl - ENSDARG00000061647
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NRXN3ENSGALG00000027255Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nrxn2b / neurexin 2b / NRXN2* / P58401* / Q9P2S2* / neurexin 2* / neurexin II*ENSDARG0000006315063
nrxn2a / neurexin 2aENSDARG0000006145461
nrxn1b / neurexin 1bENSDARG0000006363558
nrxn3b / neurexin 3b / NRXN3* / Q6P9K9* / Q9Y4C0* / Q8C985* / Q9HDB5* / neurexin 3*ENSDARG0000006269356
cntnap3 / contactin associated protein like 3ENSDARG0000006782416
cntnap2b / contactin associated protein like 2b / Q9CPW0* / Q9UHC6* / CNTNAP2* / contactin associated protein like 2*ENSDARG0000007455816
cntnap1 / contactin associated protein 1 / O54991* / P78357*ENSDARG0000007452415
cntnap5l / contactin associated protein-like 5 like / Q0V8T7* / Q0V8T8* / Q8WYK1* / Q0V8T9* / CNTNAP5* / Cntnap5c* / Cntnap5a* / Cntnap5b* / contactin associated protein like 5* / Contactin...ENSDARG0000007380213
cntnap5a / contactin associated protein-like 5a / Q0V8T7* / Q0V8T9* / Q8WYK1* / Q0V8T8* / CNTNAP5* / Cntnap5c* / Cntnap5b* / contactin associated protein like 5* / Contactin-associated prot...ENSDARG0000007392012
cntnap5b / contactin associated protein-like 5b / Q0V8T7* / Q0V8T9* / Q8WYK1* / Q0V8T8* / CNTNAP5* / Cntnap5c* / Cntnap5a* / contactin associated protein like 5* / Contactin-associated prot...ENSDARG0000007518912
cntnap2a / contactin associated protein like 2a / Q9CPW0* / Q9UHC6* / CNTNAP2* / contactin associated protein like 2*ENSDARG000000589697
nrxn3a / neurexin 3a / NRXN3* / Q6P9K9* / Q9Y4C0* / Q8C985* / Q9HDB5* / neurexin 3*ENSDARG000000437465
neurexin 2 / NRXN2 (1 of many) / NRXN2* / P58401* / Q9P2S2*ENSDARG000001131124


Protein motifs (from Interpro)
Interpro ID Name
 IPR000742  EGF-like domain
 IPR001791  Laminin G domain
 IPR003585  Neurexin/syndecan/glycophorin C
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR027789  Syndecan/Neurexin domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002040 sprouting angiogenesis IMP
 biological_processGO:0007155 cell adhesion IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001286 caudal vein plexus caudal vein plexus decreased size , abnormal
caudal vein plexus malformed , abnormal
caudal vein plexus blood circulation decreased occurrence , abnormal
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 ZFA:0005035 subintestinal vein subintestinal vein malformed , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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