ENSDARG00000061770


Danio rerio

Features
Gene ID: ENSDARG00000061770
  
Biological name :abcd4
  
Synonyms : abcd4 / ATP-binding cassette, sub-family D (ALD), member 4
  
Possible biological names infered from orthology : ATP binding cassette subfamily D member 4 / O14678 / O89016
  
Species: Danio rerio
  
Chr. number: 24
Strand: 1
Band:
Gene start: 35911020
Gene end: 35930390
  
Corresponding Affymetrix probe sets: Dr.18695.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000082913
Ensembl peptide - ENSDARP00000110201
NCBI entrez gene - 767748     See in Manteia.
swissprot - F1Q4Y1
swissprot - F1QZ54
ZFIN ID - ZDB-GENE-050517-30
Ensembl - ENSDARG00000061770
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ABCD4ENSGALG00000010229Gallus gallus
 ABCD4ENSG00000119688Homo sapiens
 Abcd4ENSMUSG00000021240Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
abcd3b / ATP-binding cassette, sub-family D (ALD), member 3b / ABCD3* / P55096* / P28288* / ATP binding cassette subfamily D member 3* / ATP-binding cassette, sub-family D (ALD), member 3*ENSDARG0000000294726
abcd1 / ATP-binding cassette, sub-family D (ALD), member 1 / P33897* / P48410* / ATP binding cassette subfamily D member 1*ENSDARG0000007487626
abcd3a / ATP-binding cassette, sub-family D (ALD), member 3a / ABCD3* / P55096* / P28288* / ATP binding cassette subfamily D member 3* / ATP-binding cassette, sub-family D (ALD), member 3*ENSDARG0000010408525
abcd2 / ATP-binding cassette, sub-family D (ALD), member 2 / Q9UBJ2* / ATP binding cassette subfamily D member 2*ENSDARG0000005940915


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR011527  ABC transporter type 1, transmembrane domain
 IPR017871  ABC transporter, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA


Pathways (from Reactome)
Pathway description
Cobalamin (Cbl, vitamin B12) transport and metabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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