ENSDARG00000061797


Danio rerio

Features
Gene ID: ENSDARG00000061797
  
Biological name :zgc:154006
  
Synonyms : zgc:154006
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 24386453
Gene end: 24403153
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000083005
Ensembl peptide - ENSDARP00000127777
Ensembl peptide - ENSDARP00000132991
Ensembl peptide - ENSDARP00000144463
NCBI entrez gene - 563016     See in Manteia.
RefSeq - NM_001080004
RefSeq Peptide - NP_001073473
swissprot - Q08BB8
swissprot - X1WC34
ZFIN ID - ZDB-GENE-061013-134
Ensembl - ENSDARG00000061797
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 OCLNENSGALG00000037316Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch73-61d6.3ENSDARG0000005782644
oclna / occludin a / OCLN* / Q16625* / Q61146* / occludin*ENSDARG0000000510828
oclnb / occludin b / OCLN* / Q16625* / Q61146* / occludin*ENSDARG0000000309127


Protein motifs (from Interpro)
Interpro ID Name
 IPR002958  Occludin
 IPR008253  Marvel domain
 IPR010844  Occludin homology domain
 IPR031176  ELL/occludin family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0070830 bicellular tight junction assembly IEA
 cellular_componentGO:0005923 bicellular tight junction IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr