ENSDARG00000062016


Danio rerio

Features
Gene ID: ENSDARG00000062016
  
Biological name :vps51
  
Synonyms : vacuolar protein sorting 51 homolog (S. cerevisiae) / vps51
  
Possible biological names infered from orthology : Q3UVL4 / Q71KT5 / Q9UID3 / Tm7sf2 / transmembrane 7 superfamily member 2 / VPS51, GARP complex subunit
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 26961965
Gene end: 26972430
  
Corresponding Affymetrix probe sets: Dr.6128.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000083577
swissprot - F1QLF1
ZFIN ID - ZDB-GENE-030131-6008
Ensembl - ENSDARG00000062016
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 VPS51ENSGALG00000004166Gallus gallus
 VPS51ENSG00000149823Homo sapiens
 Q3UVL4ENSMUSG00000024799Mus musculus
 Vps51ENSMUSG00000024797Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR014812  Vacuolar protein sorting-associated protein 51
 IPR016159  Cullin repeat-like-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Retrograde transport at the Trans-Golgi-Network


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000036 liver and biliary system liver and biliary system malformed , abnormal
Show

 ZFA:0000112 gut gut quality , abnormal
Show

 ZFA:0000123 liver liver quality , abnormal
liver fatty , abnormal
Show

 ZFA:0000303 female organism female organism trunk increased size , abnormal
Show

 ZFA:0001094 whole organism whole organism dead , abnormal
whole organism viability , abnormal
Show

 ZFA:0001100 hepatic duct hepatic duct physical object quality , abnormal
Show

 ZFA:0001249 exocrine pancreas exocrine pancreas Golgi apparatus dilated , abnormal
Show

 ZFA:0001338 intestine intestine fatty , abnormal
Show

 ZFA:0005169 intrahepatic bile duct intrahepatic bile duct decreased amount , abnormal
Show

 ZFA:0009111 hepatocyte hepatocyte decreased functionality , abnormal
Show

 ZFA:0009269 enterocyte enterocyte Golgi apparatus dilated , abnormal
Show

 ZFA:0009397 cholangiocyte cholangiocyte Golgi apparatus dilated , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr