ENSDARG00000062226


Danio rerio

Features
Gene ID: ENSDARG00000062226
  
Biological name :ino80db
  
Synonyms : INO80 complex subunit Db / ino80db
  
Possible biological names infered from orthology : INO80 complex subunit D / INO80D / Q53TQ3
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 13207139
Gene end: 13254851
  
Corresponding Affymetrix probe sets: Dr.13218.1.A1_at (Zebrafish Array)   Dr.6499.1.A1_at (Zebrafish Array)   NM_001080588_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000084158
Ensembl peptide - ENSDARP00000149517
Ensembl peptide - ENSDARP00000153548
NCBI entrez gene - 563304     See in Manteia.
RefSeq - NM_001080588
RefSeq Peptide - NP_001074057
swissprot - F1R6M9
ZFIN ID - ZDB-GENE-070112-2072
Ensembl - ENSDARG00000062226
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 INO80DENSGALG00000029701Gallus gallus
 INO80DENSG00000114933Homo sapiens
 Ino80dENSMUSG00000040865Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ino80da / INO80 complex subunit Da / INO80D* / Q53TQ3* / INO80 complex subunit D*ENSDARG0000010472746
kansl2 / KAT8 regulatory NSL complex subunit 2 / Q8BQR4* / Q9H9L4*ENSDARG0000005631810


Protein motifs (from Interpro)
Interpro ID Name
 IPR000283  NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site
 IPR001041  2Fe-2S ferredoxin-type iron-sulfur binding domain
 IPR006656  Molybdopterin oxidoreductase
 IPR006963  Molybdopterin oxidoreductase, 4Fe-4S domain
 IPR010228  NADH:ubiquinone oxidoreductase, subunit G
 IPR012675  Beta-grasp domain superfamily
 IPR015405  NADH-quinone oxidoreductase, chain G, C-terminal
 IPR019574  NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding
 IPR025927  Potential DNA-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
UCH proteinases
DNA Damage Recognition in GG-NER


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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