ENSDARG00000062385


Danio rerio

Features
Gene ID: ENSDARG00000062385
  
Biological name :flcn
  
Synonyms : flcn / folliculin
  
Possible biological names infered from orthology : AC055811.2 / Q8NFG4 / Q8QZS3
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 13818500
Gene end: 13847335
  
Corresponding Affymetrix probe sets: Dr.9036.1.A1_at (Zebrafish Array)   NM_001040373_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000118439
Ensembl peptide - ENSDARP00000133243
Ensembl peptide - ENSDARP00000084624
NCBI entrez gene - 678628     See in Manteia.
RefSeq - NM_001040373
RefSeq Peptide - NP_001035463
swissprot - E9QIZ9
swissprot - F1R3E5
ZFIN ID - ZDB-GENE-060421-3470
Ensembl - ENSDARG00000062385
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000004816Gallus gallus
 AC055811.2ENSG00000264187Homo sapiens
 FLCNENSG00000154803Homo sapiens
 FlcnENSMUSG00000032633Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR021713  Folliculin
 IPR032035  Folliculin, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 biological_processGO:0065009 regulation of molecular function IEA
 molecular_functionGO:0005085 guanyl-nucleotide exchange factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000006 ball ball increased size , abnormal
Show

 ZFA:0000008 brain brain cell death increased occurrence , abnormal
brain edematous , abnormal
brain nucleus increased amount , abnormal
brain nucleus decreased amount , abnormal
brain regulation of cell cycle decreased process quality , abnormal
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 ZFA:0000050 optic vesicle optic vesicle nucleus increased amount , abnormal
optic vesicle nucleus decreased amount , abnormal
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 ZFA:0000106 extension extension decreased thickness , abnormal
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 ZFA:0000152 retina retina regulation of cell cycle decreased process quality , abnormal
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 ZFA:0000155 somite somite U-shaped , abnormal
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 ZFA:0001115 trunk trunk cell death increased occurrence , abnormal
Show

 ZFA:0001117 post-vent region post-vent region notochord bent , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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