ENSDARG00000062579


Danio rerio

Features
Gene ID: ENSDARG00000062579
  
Biological name :kremen1
  
Synonyms : kremen1 / kringle containing transmembrane protein 1
  
Possible biological names infered from orthology : Kremen protein 1 / Q96MU8 / Q99N43
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 16151944
Gene end: 16274058
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000085117
Ensembl peptide - ENSDARP00000118479
NCBI entrez gene - 100141352     See in Manteia.
RefSeq - NM_001114917
RefSeq Peptide - NP_001108389
swissprot - F1QB55
swissprot - B0BLV6
ZFIN ID - ZDB-GENE-070705-262
Ensembl - ENSDARG00000062579
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 KREMEN1ENSGALG00000005808Gallus gallus
 Q96MU8ENSG00000183762Homo sapiens
 Q99N43ENSMUSG00000020393Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000001  Kringle
 IPR000859  CUB domain
 IPR002889  Carbohydrate-binding WSC
 IPR013806  Kringle-like fold
 IPR018056  Kringle, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001525 angiogenesis IGI
 biological_processGO:0001889 liver development IGI
 biological_processGO:0048884 neuromast development IMP
 biological_processGO:0048903 anterior lateral line neuromast hair cell differentiation IMP
 biological_processGO:0048916 posterior lateral line development IMP
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000243 neuromast neuromast increased size , abnormal
neuromast has extra parts of type neuromast hair cell , abnormal
neuromast increased area , abnormal
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 ZFA:0000944 posterior lateral line posterior lateral line has fewer parts of type neuromast , abnormal
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 ZFA:0001058 caudal fin caudal fin lacks all parts of type neuromast , abnormal
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 ZFA:0001115 trunk trunk posterior region has fewer parts of type neuromast , abnormal
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 ZFA:0001157 posterior lateral line primordium posterior lateral line primordium cell death increased process quality , abnormal
posterior lateral line primordium cell proliferation decreased process quality , abnormal
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 ZFA:0001285 intersegmental vessel intersegmental vessel decreased length , abnormal
intersegmental vessel absent , abnormal
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 ZFA:0001469 lateral line lateral line has fewer parts of type neuromast , abnormal
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 ZFA:0009139 endodermal cell endodermal cell decreased amount , abnormal
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 ZFA:0009366 hair cell hair cell has extra parts of type neuromast , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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